RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 LMO3Q8TAP4 145 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 CENPTQ96BT3 561 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 NAP1L3Q99457 506 aaPredicted RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TMEM109Q9BVC6 243 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 AP1M1Q9BXS5 423 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 TGIF2Q9GZN2 237 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DDX47Q9H0S4 455 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 RAB17Q9H0T7 212 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DEFB129Q9H1M3 183 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 GOLPH3Q9H4A6 298 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 BCAS3Q9H6U6 928 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 A1CFQ9NQ94 594 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 AGPAT3Q9NRZ7 376 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ZDHHC18Q9NUE0 388 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 RGL1Q9NZL6 768 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 USP21Q9UK80 565 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 DNAJC12Q9UKB3 198 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 FNDC3AQ9Y2H6 1198 aaKnown RBP6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SAMM50Q9Y512 469 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF536O15090 1300 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SPATA31A6Q5VVP1 1343 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 SIPA1L1O43166 1804 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 KIF13BQ9NQT8 1826 aa6.18□□□□□ -1.42
VPS33A-203ENST00000536212 UBR3Q6ZT12 1888 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 A6NHS1 94 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 VGLL3A8MV65 326 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 MIF4GDA9UHW6 222 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CLIC2O15247 247 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 MAPK13O15264 365 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 TTI1O43156 1089 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DAPK3O43293 454 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 KIAA0754O94854 1291 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 GGPS1O95749 300 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 GHRP10912 638 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 BMP3P12645 472 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 TNFAIP3P21580 790 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 HMGB2P26583 209 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 NMT1P30419 496 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 GBP1P32455 592 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CTNNA1P35221 906 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 USP8P40818 1118 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PRELPP51888 382 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 SEC24CP53992 1094 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ACTN3Q08043 901 aaPredicted RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 MAPK7Q13164 816 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ALCAMQ13740 583 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DHX34Q14147 1143 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CYP1B1Q16678 543 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ABCB5Q2M3G0 1257 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 SHROOM1Q2M3G4 852 aaPredicted RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CBWD6Q4V339 395 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 LACTB2Q53H82 288 aaPredicted RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CBWD3Q5JTY5 395 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CBWD5Q5RIA9 395 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DACT2Q5SW24 774 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 STRIP1Q5VSL9 837 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 TCERG1LQ5VWI1 586 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 C11orf63Q6NUN7 778 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ZDHHC24Q6UX98 284 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ARMC9Q7Z3E5 817 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DAAM2Q86T65 1068 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DNAAF5Q86Y56 855 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 RHOT2Q8IXI1 618 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 SLC35G2Q8TBE7 412 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 NEK9Q8TD19 979 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 MORC4Q8TE76 937 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 P3H4Q92791 437 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ARHGEF26Q96DR7 871 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 DYDC2Q96IM9 177 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 NACC1Q96RE7 527 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 UIMC1Q96RL1 719 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 RPS6KC1Q96S38 1066 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 WDR18Q9BV38 432 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 FAM129AQ9BZQ8 928 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 EPB41L4BQ9H329 900 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 RABEP2Q9H5N1 569 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 RUBCNLQ9H714 662 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 VCPKMTQ9H867 229 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CNOT10Q9H9A5 744 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 ACTR5Q9H9F9 607 aaPredicted RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PARVGQ9HBI0 331 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 APEX2Q9UBZ4 518 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 AMACRQ9UHK6 382 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PPP1R9AQ9ULJ8 1098 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PRR12Q9ULL5 1215 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 UTP11Q9Y3A2 253 aaKnown RBP6.17□□□□□ -1.42
VPS33A-203ENST00000536212 CAPN7Q9Y6W3 813 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 PFASO15067 1338 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 IGSF9BQ9UPX0 1349 aa6.17□□□□□ -1.42
VPS33A-203ENST00000536212 NRXN2Q9P2S2 1712 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 UBAP1LF5GYI3 381 aa6.16□□□□□ -1.42
VPS33A-203ENST00000536212 KIAA0391O15091 583 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms