RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ZNF658Q5TYW1 1059 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SPATA1Q5VX52 437 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CD302Q8IX05 232 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 MRPL43Q8N983 215 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TMEM174Q8WUU8 243 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TSPAN18Q96SJ8 248 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CHST7Q9NS84 486 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 DMAC2Q9NW81 257 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 UBQLN1Q9UMX0 589 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TRAF3IP3Q9Y228 551 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 DERAQ9Y315 318 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 C2CD2Q9Y426 696 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 IRAK3Q9Y616 596 aa12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ZNF233A6NK53 670 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 I3L4J1 428 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CXCL14O95715 111 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 GLP2RO95838 553 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 NR3C1P04150 777 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 RPL9P32969 192 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CASP4P49662 377 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PMS1P54277 932 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DSG1Q02413 1049 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SNRNP35Q16560 246 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DUSP6Q16828 381 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CTC1Q2NKJ3 1217 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 XXYLT1Q8NBI6 393 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 VN1R2Q8NFZ6 395 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 GPT2Q8TD30 523 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CLSTN2Q9H4D0 955 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 IGFLR1Q9H665 355 aa12.27□□□□□ -0.45
TNFRSF1A-208ENST00000536194 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 BIN1O00499 593 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 C2CD2LO14523 706 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 LTBRP36941 435 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 GLUD2P49448 558 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CYP24A1Q07973 514 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KCNC3Q14003 757 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 MORC3Q14149 939 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 RTP2Q5QGT7 225 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 FAM171A1Q5VUB5 890 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 BEST2Q8NFU1 509 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 OR5B17Q8NGF7 314 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 MTMR12Q9C0I1 747 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TLE6Q9H808 572 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 DPP3Q9NY33 737 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 STK39Q9UEW8 545 aa12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 MTCL1Q9Y4B5 1905 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PIRO00625 290 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 SPTLC1O15269 473 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 EXOC3O60645 756 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CLASP2O75122 1294 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TBX10O75333 385 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 KIF20AO95235 890 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 URODP06132 367 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CNPP09543 421 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 FGFR3P22607 806 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CA8P35219 290 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 AARSP49588 968 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 TFF2Q03403 129 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 ADAM15Q13444 863 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PSMD6Q15008 389 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 NFIL3Q16649 462 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CENPPQ6IPU0 288 aa12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 PRSS55Q6UWB4 352 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-208ENST00000536194 CEP57Q86XR8 500 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms