RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 POTEHQ6S545 545 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 C1orf186Q6ZWK4 172 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 SUSD3Q96L08 255 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 BCO2Q9BYV7 579 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 CDT1Q9H211 546 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 PRMT8Q9NR22 394 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 CDY1Q9Y6F8 540 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 MIA3Q5JRA6 1907 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 M0QZQ0 153 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 NCAM2O15394 837 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 OAZ2O95190 189 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 DCNP07585 359 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 RHOP08100 348 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 PTPN2P17706 415 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 FCARP24071 287 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 WEE1P30291 646 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 NTHL1P78549 312 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 ROR1Q01973 937 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 ZBTB6Q15916 424 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 MAP4K3Q8IVH8 894 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 DRC1Q96MC2 740 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 HSFX1Q9UBD0 423 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 MRPS17Q9Y2R5 130 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 CHD8Q9HCK8 2581 aa12.3□□□□□ -0.44
CLSTN3-206ENST00000535668 CITO14578 2027 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 WDR27A2RRH5 827 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 H7C4K7 107 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MAN2B1O00754 1011 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ZNF197O14709 1029 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 CCL16O15467 120 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 TOM1L1O75674 476 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 PAPSS2O95340 614 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 TDGF1P13385 188 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 CYP3A5P20815 502 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 SDHBP21912 280 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 TKTP29401 623 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 LRPAP1P30533 357 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 CCT6AP40227 531 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ADCY1Q08828 1119 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ZNF174Q15697 407 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 SLC5A9Q2M3M2 681 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 RINT1Q6NUQ1 792 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 GLYCTKQ8IVS8 523 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MMTAG2Q9BU76 263 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 GPR88Q9GZN0 384 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ZSCAN32Q9NX65 697 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 AFF4Q9UHB7 1163 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 KIAA1024Q9UPX6 916 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 KMT2BQ9UMN6 2715 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-206ENST00000535668 ARNTLO00327 626 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 PODXLO00592 558 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 DTNBO60941 627 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 POU5F1Q01860 360 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 MCL1Q07820 350 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 PTGDRQ13258 359 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 DMP1Q13316 513 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 SNW1Q13573 536 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 TMEM161BQ8NDZ6 487 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 E2F7Q96AV8 911 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 ASB16Q96NS5 453 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 KIFC3Q9BVG8 833 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms