RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 NRDE2Q9H7Z3 1164 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 TUBGCP4Q9UGJ1 667 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 RALGAPA2Q2PPJ7 1873 aa16.83■□□□□ 0.29
CNN1-202ENST00000535659 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.28
CNN1-202ENST00000535659 RPL9P32969 192 aaKnown RBP16.83■□□□□ 0.28
CNN1-202ENST00000535659 KRT31Q15323 416 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 MAN2A1Q16706 1144 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 COLGALT2Q8IYK4 626 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
CNN1-202ENST00000535659 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
CNN1-202ENST00000535659 FAM84AQ96KN4 292 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 MTMR12Q9C0I1 747 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 CWH43Q9H720 699 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 MMRN2Q9H8L6 949 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 PCDHA11Q9Y5I1 949 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 CITO14578 2027 aa16.83■□□□□ 0.28
CNN1-202ENST00000535659 B4GALT3O60512 393 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
CNN1-202ENST00000535659 LRPAP1P30533 357 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 GUCY2FP51841 1108 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 ZACNQ401N2 412 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 VWA3BQ502W6 1294 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 KRT39Q6A163 491 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 C15orf39Q6ZRI6 1047 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 C1orf127Q8N9H9 656 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 UROC1Q96N76 676 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 TMEM175Q9BSA9 504 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 VPS16Q9H269 839 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 NDST4Q9H3R1 872 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 TMEM8AQ9HCN3 771 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 DNAJB4Q9UDY4 337 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 ITGA11Q9UKX5 1188 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 MRPL42Q9Y6G3 142 aaKnown RBP16.82■□□□□ 0.28
CNN1-202ENST00000535659 COL4A6Q14031 1691 aa16.82■□□□□ 0.28
CNN1-202ENST00000535659 PMM2O15305 246 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 PHACTR2O75167 634 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 CST3P01034 146 aaPredicted RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 GALTP07902 379 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 TPM2P07951 284 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 MYOGP15173 224 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 FMO5P49326 533 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 ALDH7A1P49419 539 aaKnown RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 CLCNKBP51801 687 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 RBP5P82980 135 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 BIRC3Q13489 604 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 UPP1Q16831 310 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 SPOUT1Q5T280 376 aaKnown RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 TMEM130Q8N3G9 435 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 CXorf38Q8TB03 319 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 TAB2Q9NYJ8 693 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 HCSTQ9UBK5 93 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 AGAP1Q9UPQ3 857 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 FAN1Q9Y2M0 1017 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 SZT2Q5T011 3432 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 ANK1P16157 1881 aa16.81■□□□□ 0.28
CNN1-202ENST00000535659 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
CNN1-202ENST00000535659 A0A1W2PPC1 479 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 ANO9A1A5B4 782 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CASTOR2A6NHX0 329 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 PIRO00625 290 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 NRP1O14786 923 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 P4HA2O15460 535 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
CNN1-202ENST00000535659 ITGB3P05106 788 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 KRT19P08727 400 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 OR1G1P47890 313 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 MXI1P50539 228 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 COPB1P53618 953 aaKnown RBP16.8■□□□□ 0.28
CNN1-202ENST00000535659 BCAR1P56945 870 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 TRPC3Q13507 836 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CBWD6Q4V339 395 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CBWD3Q5JTY5 395 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CBWD5Q5RIA9 395 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 C9orf57Q5W0N0 161 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 APTXQ7Z2E3 356 aaKnown RBP16.8■□□□□ 0.28
CNN1-202ENST00000535659 PAAF1Q9BRP4 392 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 TRIP11Q15643 1979 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CARNS1A5YM72 827 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 PODXLO00592 558 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 N4BP1O75113 896 aaKnown RBP16.8■□□□□ 0.28
CNN1-202ENST00000535659 SERPINC1P01008 464 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 LAG3P18627 525 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 SLC11A1P49279 550 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CETN1Q12798 172 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 RAB30Q15771 203 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
CNN1-202ENST00000535659 CLP1Q92989 425 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms