RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 PTGER3P43115 390 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 ATXN3P54252 364 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-214ENST00000535222 TLE3Q04726 772 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 GFPT1Q06210 699 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-214ENST00000535222 FBXO43Q4G163 708 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 ZNF410Q86VK4 478 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 TBC1D10CQ8IV04 446 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 GPATCH3Q96I76 525 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 FNBP1Q96RU3 617 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 AGPAT5Q9NUQ2 364 aa8.43□□□□□ -1.06
CPSF7-214ENST00000535222 PTPRDP23468 1912 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 ICE1Q9Y2F5 2266 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 KNL1Q8NG31 2342 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 A0A087WZ62 844 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 RNF40O75150 1001 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 HMMRO75330 724 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 ABLIM3O94929 683 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 RLBP1P12271 317 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 HLA-EP13747 358 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 CR2P20023 1033 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 OR1D2P34982 312 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 P2RY2P41231 377 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 DGKEP52429 567 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 UBAP2LQ14157 1087 aaKnown RBP8.42□□□□□ -1.06
CPSF7-214ENST00000535222 DMC1Q14565 340 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 NBR1Q14596 966 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 GRM4Q14833 912 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 PTPAQ15257 358 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 MIS18BP1Q6P0N0 1132 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 PDZD4Q76G19 769 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-214ENST00000535222 LPCAT2Q7L5N7 544 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 RABEPKQ7Z6M1 372 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 YAF2Q8IY57 180 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 FAM9BQ8IZU0 186 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 LEMD2Q8NC56 503 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 CNOT6LQ96LI5 555 aaKnown RBP8.42□□□□□ -1.06
CPSF7-214ENST00000535222 CEP89Q96ST8 783 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 CORO1BQ9BR76 489 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 FDXACB1Q9BRP7 624 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-214ENST00000535222 SNTG2Q9NY99 539 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 HSPBP1Q9NZL4 362 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 MTRRQ9UBK8 725 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 INVSQ9Y283 1065 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 BACE2Q9Y5Z0 518 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 NEDD4P46934 1319 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 MYH9P35579 1960 aaKnown RBP8.42□□□□□ -1.06
CPSF7-214ENST00000535222 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
CPSF7-214ENST00000535222 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ADAMTS9Q9P2N4 1935 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 TADA2AO75478 443 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 DRD1P21728 446 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 SCNN1GP51170 649 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 TARBP2Q15633 366 aaKnown RBP8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ITPRIPL2Q3MIP1 535 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 CEP55Q53EZ4 464 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 CYP4A22Q5TCH4 519 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 MARCH9Q86YJ5 346 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ITPRIPQ8IWB1 547 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 TCEAL8Q8IYN2 117 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ZNF461Q8TAF7 563 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ACDQ96AP0 544 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 FAM167AQ96KS9 214 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 GAD1Q99259 594 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 GTPBP2Q9BX10 602 aaKnown RBP8.41□□□□□ -1.06
CPSF7-214ENST00000535222 IFT122Q9HBG6 1241 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 FBRSL1Q9HCM7 1045 aaKnown RBP8.41□□□□□ -1.06
CPSF7-214ENST00000535222 ZSWIM5Q9P217 1185 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 GIT1Q9Y2X7 761 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 PCNX1Q96RV3 2341 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 CACNA1DQ01668 2161 aa8.41□□□□□ -1.06
CPSF7-214ENST00000535222 EGFP01133 1207 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 SYPP08247 313 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 ITGA4P13612 1032 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 ATF2P15336 505 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 ITPKAP23677 461 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 ELAVL2Q12926 359 aaKnown RBP8.4□□□□□ -1.06
CPSF7-214ENST00000535222 DRP2Q13474 957 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 LY6DQ14210 128 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-214ENST00000535222 RTP5Q14D33 572 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 SEC23AQ15436 765 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 FAM171A1Q5VUB5 890 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 LYSMD4Q5XG99 296 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 SLC8B1Q6J4K2 584 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 NIPA1Q7RTP0 329 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 CATSPER4Q7RTX7 472 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 HAUS6Q7Z4H7 955 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 CKAP2LQ8IYA6 745 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 BAP1Q92560 729 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 NXPE2Q96DL1 559 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
CPSF7-214ENST00000535222 SCLT1Q96NL6 688 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms