RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MYO7AQ13402 2215 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 UBE4BO95155 1302 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 A0A087WWV3 80 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CASTOR2A6NHX0 329 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 SSBP05455 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 SLC10A6Q3KNW5 377 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 RASSF8Q8NHQ8 419 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 TMEM206Q9H813 350 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 ANK1P16157 1881 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 VPS37CA5D8V6 355 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 STX6O43752 255 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 OAZ2O95190 189 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 GARTP22102 1010 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 WEE1P30291 646 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 MLLT6P55198 1093 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 RBM10P98175 930 aaKnown RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 BICD1Q96G01 975 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 MSANTD3Q96H12 275 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 SHDQ96IW2 340 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 TNMDQ9H2S6 317 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 GDE1Q9NZC3 331 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CDH7Q9ULB5 785 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 K7ENM7 598 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CUTAO60888 179 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 PPP1R37O75864 691 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 SRFP11831 508 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 FSHRP23945 695 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 MARCKSP29966 332 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CLCNKBP51801 687 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 ACCSQ96QU6 501 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 KIAA1586Q9HCI6 787 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 USP25Q9UHP3 1055 aa11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
CSDE1-217ENST00000534699 CSPG5O95196 566 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 CYP11A1P05108 521 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 LIG1P18858 919 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 ELF1P32519 619 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 PNPLA4P41247 253 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 PFKPQ01813 784 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
CSDE1-217ENST00000534699 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-217ENST00000534699 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-217ENST00000534699 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 CUL9Q8IWT3 2517 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-217ENST00000534699 C8AP07357 584 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 LAMP2P13473 410 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 ATF2P15336 505 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 PTPN2P17706 415 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 AVPR2P30518 371 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 MCM6Q14566 821 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 C1orf228Q6PIY5 440 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 C12orf76Q8N812 135 aaPredicted RBP11.31□□□□□ -0.6
CSDE1-217ENST00000534699 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 SEMA4AQ9H3S1 761 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
CSDE1-217ENST00000534699 FAM86C2PA6NEL3 165 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 PROB1E7EW31 1015 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 C2CD2LO14523 706 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 HNRNPDLO14979 420 aaKnown RBP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 FAM189A1O60320 539 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 EPHA5P54756 1037 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 PRKCQQ04759 706 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 DDX12PQ92771 950 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 TRPV5Q9NQA5 729 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 EIF3DO15371 548 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 ECI2O75521 394 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
CSDE1-217ENST00000534699 NELL2Q99435 816 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 KCNK12Q9HB15 430 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 CLIC4Q9Y696 253 aa11.3□□□□□ -0.6
CSDE1-217ENST00000534699 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms