RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 GTPBP4Q9BZE4 634 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 FOXQ1Q9C009 403 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 BLZF1Q9H2G9 400 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 GSX1Q9H4S2 264 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 ACAD9Q9H845 621 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 HOXC10Q9NYD6 342 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 AGTPBP1Q9UPW5 1226 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 FAN1Q9Y2M0 1017 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RIPK3Q9Y572 518 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CTDP1Q9Y5B0 961 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 UBIAD1Q9Y5Z9 338 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 DOCK5Q9H7D0 1870 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 PLXNB2O15031 1838 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 PLXNA1Q9UIW2 1896 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PVALEFA0A1B0GWK0 134 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 LRRN2O75325 713 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MED24O75448 989 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PARNO95453 639 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 GLB1P16278 677 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MUTP22033 750 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 CCT6AP40227 531 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 STAT3P40763 770 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 GRIA2P42262 883 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 TPM4P67936 248 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MRPS9P82933 396 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 AMPD3Q01432 767 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PGM5Q15124 567 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 SGO2Q562F6 1265 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ZFYVE27Q5T4F4 411 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ARTNQ5T4W7 220 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 LRCH2Q5VUJ6 765 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 HEATR6Q6AI08 1181 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 ISM2Q6H9L7 571 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 OTOP1Q7RTM1 612 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ADAT2Q7Z6V5 191 aaKnown RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 GIMAP8Q8ND71 665 aaPredicted RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 LRRN4CLQ8ND94 238 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ADCY4Q8NFM4 1077 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ERMNQ8TAM6 284 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 OPTNQ96CV9 577 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 EXOC2Q96KP1 924 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MED15Q96RN5 788 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PLIN2Q99541 437 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 RIT2Q99578 217 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 MIPEPQ99797 713 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PDCD2LQ9BRP1 358 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 POLR3CQ9BUI4 534 aaPredicted RBP6.31□□□□□ -1.4
CHKA-208ENST00000533910 WDR11Q9BZH6 1224 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ZFP64Q9NPA5 681 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PXMP2Q9NR77 195 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 HOMER2Q9NSB8 354 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
CHKA-208ENST00000533910 PFASO15067 1338 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 MYH11P35749 1972 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 FRMD3A2A2Y4 597 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 MYMKA6NI61 221 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 IPO5O00410 1097 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 SART1O43290 800 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 SH3BP5O60239 455 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 GAS7O60861 476 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 DNAJC6O75061 913 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 CNMDO75829 334 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 SLITRK5O94991 958 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ITGAVP06756 1048 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ARP10275 920 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 COPB2P35606 906 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 PPP1R2P41236 205 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 MASP1P48740 699 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 HERVK_113P62684 666 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 UBXN2AP68543 259 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ASIC1P78348 528 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 IRX3P78415 501 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 PAK1Q13153 545 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 PABPC4Q13310 644 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHKA-208ENST00000533910 BAATQ14032 418 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 NCAPH2Q6IBW4 605 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 NSMFQ6X4W1 530 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 GADL1Q6ZQY3 521 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 FASTKD5Q7L8L6 764 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ADSSL1Q8N142 457 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ZNF513Q8N8E2 541 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 TRIM44Q96DX7 344 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 DHRS1Q96LJ7 313 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 TAAR1Q96RJ0 339 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms