RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 ADSSP30520 456 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 CLUL1Q15846 466 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 ZBTB41Q5SVQ8 909 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 FAM171A1Q5VUB5 890 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 PIK3R5Q8WYR1 880 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
TSKU-204ENST00000533752 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
TSKU-204ENST00000533752 TRIP11Q15643 1979 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
TSKU-204ENST00000533752 TEX28O15482 410 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 IL18RAPO95256 599 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 GLUD1P00367 558 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 IL9P15248 144 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 LRPAP1P30533 357 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 ACOT2P49753 483 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 CLCN4P51793 760 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
TSKU-204ENST00000533752 TMEM132DQ14C87 1099 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 ARMCX5Q6P1M9 558 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 EPM2AIP1Q7L775 607 aaPredicted RBP17.2■□□□□ 0.34
TSKU-204ENST00000533752 HS2ST1Q7LGA3 356 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 NT5DC4Q86YG4 428 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 BEST2Q8NFU1 509 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 POP1Q99575 1024 aaKnown RBP17.2■□□□□ 0.34
TSKU-204ENST00000533752 TUBGCP4Q9UGJ1 667 aa17.2■□□□□ 0.34
TSKU-204ENST00000533752 PDCD11Q14690 1871 aaKnown RBP17.2■□□□□ 0.34
TSKU-204ENST00000533752 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 SYN3O14994 580 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 EXTL3O43909 919 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 FGFR3P22607 806 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 PAX3P23760 479 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 CASP1P29466 404 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 ITIH3Q06033 890 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 PSMD2Q13200 908 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 ZBTB6Q15916 424 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 PSMD5Q16401 504 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 BMT2Q1RMZ1 405 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 RTP2Q5QGT7 225 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 C3orf58Q8NDZ4 430 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 ZNF507Q8TCN5 953 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 HPS3Q969F9 1004 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 SFXN1Q9H9B4 322 aa17.19■□□□□ 0.34
TSKU-204ENST00000533752 CGNQ9P2M7 1197 aaKnown RBP17.19■□□□□ 0.34
TSKU-204ENST00000533752 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
TSKU-204ENST00000533752 ZNF202O95125 648 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 EPCAMP16422 314 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 SPATA1Q5VX52 437 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 JADE1Q6IE81 842 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 CES5AQ6NT32 575 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 SYCE2Q6PIF2 218 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 ANKS3Q6ZW76 656 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 BRSK2Q8IWQ3 736 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 GLIS3Q8NEA6 775 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 CBWD1Q9BRT8 395 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 IKZF4Q9H2S9 585 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 BDP1A6H8Y1 2624 aa17.18■□□□□ 0.34
TSKU-204ENST00000533752 KLRC4O43908 158 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 NFICP08651 508 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 MCM4P33991 863 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 SPAG1Q07617 926 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 KMT5BQ4FZB7 885 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 PRSS55Q6UWB4 352 aaPredicted RBP17.17■□□□□ 0.34
TSKU-204ENST00000533752 CD300LGQ6UXG3 332 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 CRELD2Q6UXH1 353 aaPredicted RBP17.17■□□□□ 0.34
TSKU-204ENST00000533752 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 APPL2Q8NEU8 664 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
TSKU-204ENST00000533752 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 SUSD6Q92537 303 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 SAAL1Q96ER3 474 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 SUSD3Q96L08 255 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 RIPOR3Q96MK2 946 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 NECTIN4Q96NY8 510 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 S1PR5Q9H228 398 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 ADAM7Q9H2U9 754 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 PLEKHA4Q9H4M7 779 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 SLC39A2Q9NP94 309 aa17.17■□□□□ 0.34
TSKU-204ENST00000533752 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
TSKU-204ENST00000533752 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms