RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 NT5C1B-RDH14C9J2C7 533 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 F8W810 466 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 CETN3O15182 167 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 ALDH2P05091 517 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 LRPAP1P30533 357 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 CTNNB1P35222 781 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 GUCY2FP51841 1108 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 TMEM132DQ14C87 1099 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 SURF1Q15526 300 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 PSMC2P35998 433 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 PLCB3Q01970 1234 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 TYRO3Q06418 890 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 ENPEPQ07075 957 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 UPP1Q16831 310 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 C11orf57Q6ZUT1 292 aaPredicted RBP13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 OR5B17Q8NGF7 314 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 RABGGTAQ92696 567 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 INTS13Q9NVM9 706 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 PCDHB12Q9Y5F1 795 aa13.78□□□□□ -0.2
RPUSD4-208ENST00000533628 H3BNC9 293 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 LPXNO60711 386 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 ITGB1P05556 798 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 OR1G1P47890 313 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 CLCNKBP51801 687 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 DLG4P78352 724 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 GRIN2CQ14957 1233 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 STX1AQ16623 288 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 ARNTL2Q8WYA1 636 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 IGSF21Q96ID5 467 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 UROC1Q96N76 676 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 DACH1Q9UI36 760 aa13.77□□□□□ -0.21
RPUSD4-208ENST00000533628 ANO9A1A5B4 782 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 SYCE3A1L190 88 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 CARNS1A5YM72 827 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 RFXAPO00287 272 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 FGF18O76093 207 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 LMBRD2Q68DH5 695 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 IRF2BP1Q8IU81 584 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 WDR49Q8IV35 697 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 SPPL3Q8TCT6 385 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PLXNA4Q9HCM2 1894 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PIRO00625 290 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PPEF2O14830 753 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 KIF4AO95239 1232 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 DNAJB1P25685 340 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PPM1AP35813 382 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 CAMK1Q14012 370 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 ZNF697Q5TEC3 545 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 BEST2Q8NFU1 509 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 COLEC11Q9BWP8 271 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
RPUSD4-208ENST00000533628 PODXLO00592 558 aa13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 GRM6O15303 877 aa13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 XPOTO43592 962 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 VAMP7P51809 220 aa13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 TFAMQ00059 246 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 GPM6BQ13491 265 aa13.75□□□□□ -0.21
RPUSD4-208ENST00000533628 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms