RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CHEK2O96017 543 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 PDGFRBP09619 1106 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 SNAPC2Q13487 334 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 STILQ15468 1287 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 TRMT10CQ7L0Y3 403 aaKnown RBP18.53■□□□□ 0.56
PHRF1-205ENST00000533464 CBWD2Q8IUF1 395 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 VGLL2Q8N8G2 317 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 SCFD2Q8WU76 684 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 SCFD1Q8WVM8 642 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 CYTH2Q99418 400 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 C17orf75Q9HAS0 396 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 SPON1Q9HCB6 807 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
PHRF1-205ENST00000533464 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 APRTP07741 180 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 TYK2P29597 1187 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 LONRF1Q17RB8 773 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 MFSD14CQ5VZR4 134 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 GPAT2Q6NUI2 795 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 CDR2LQ86X02 465 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-205ENST00000533464 TPCN2Q8NHX9 752 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 ERP44Q9BS26 406 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 NIF3L1Q9GZT8 377 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 MAP3K7O43318 606 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 CDH16O75309 829 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 GRAP2O75791 330 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 MDM2Q00987 491 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-205ENST00000533464 FOXP2O15409 715 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 GTF2H1P32780 548 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 SESN2P58004 480 aaPredicted RBP18.52■□□□□ 0.56
PHRF1-205ENST00000533464 CDK17Q00537 523 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 IFT43Q96FT9 208 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 TRABDQ9H4I3 376 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 ETNK1Q9HBU6 452 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
PHRF1-205ENST00000533464 GOLGA8RI6L899 631 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.55
PHRF1-205ENST00000533464 IL1RL1Q01638 556 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 POU5F1BQ06416 359 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 URGCPQ8TCY9 931 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 CBWD1Q9BRT8 395 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 ANGPTL2Q9UKU9 493 aa18.52■□□□□ 0.55
PHRF1-205ENST00000533464 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ANKRD20A4Q4UJ75 823 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ANKRD20A8PQ5CZ79 823 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ANKRD20A2Q5SQ80 823 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ANKRD20A1Q5TYW2 823 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 BTBD8Q5XKL5 378 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 LRIG3Q6UXM1 1119 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 APPL2Q8NEU8 664 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ZIM3Q96PE6 472 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ALG13Q9NP73 1137 aaKnown RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 RAB6BQ9NRW1 208 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 DBR1Q9UK59 544 aaKnown RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 NEU2Q9Y3R4 380 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 BAZ2BQ9UIF8 2168 aaKnown RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 SHMT1P34896 483 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 SENP1Q9P0U3 644 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 COL5A2P05997 1499 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 HBP1O60381 514 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 CDC42EP1Q00587 391 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 GMCL1P1Q8NEA9 526 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 PRMT7Q9NVM4 692 aaPredicted RBP18.51■□□□□ 0.55
PHRF1-205ENST00000533464 GTF3C4Q9UKN8 822 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 ISCUQ9H1K1 167 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 CARD9Q9H257 536 aa18.51■□□□□ 0.55
PHRF1-205ENST00000533464 TCP11X1B4DZS4 312 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 GNGT2O14610 69 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 ATP9BO43861 1147 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 PPARGP37231 505 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 YWHAHQ04917 246 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 PNKPQ96T60 521 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 SPON2Q9BUD6 331 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 NOP53Q9NZM5 478 aaKnown RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 AKAP3O75969 853 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 SEZ6Q53EL9 994 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 ZNF677Q86XU0 584 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 GCNAQ96QF7 691 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 PRMT1Q99873 361 aaKnown RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 NT5C1AQ9BXI3 368 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 MAGEB5Q9BZ81 275 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 ABCF3Q9NUQ8 709 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 GTSE1Q9NYZ3 720 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 WTIPA6NIX2 430 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 DIAPH2O60879 1101 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 CYP2C19P33261 490 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 TAF1CQ15572 869 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 KYNUQ16719 465 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 OR6P1Q8NGX9 317 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 IL18RAPO95256 599 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 C6orf222P0C671 652 aaPredicted RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 SARSP49591 514 aaKnown RBP18.5■□□□□ 0.55
PHRF1-205ENST00000533464 GRAMD1BQ3KR37 738 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms