RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 C8AP07357 584 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 NTHL1P78549 312 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 SPAG1Q07617 926 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 PDXDC1Q6P996 788 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 MYCT1Q8N699 235 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 LARP4BQ92615 738 aaKnown RBP20.68■□□□□ 0.9
SSH3-209ENST00000532600 CHAMP1Q96JM3 812 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 USP28Q96RU2 1077 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 PARVGQ9HBI0 331 aa20.68■□□□□ 0.9
SSH3-209ENST00000532600 SRPRBQ9Y5M8 271 aaKnown RBP20.68■□□□□ 0.9
SSH3-209ENST00000532600 TTC26A0AVF1 554 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 K7ENM7 598 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 FAM13AO94988 1023 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 NMT1P30419 496 aaKnown RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 AVPR2P30518 371 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 CEBPZQ03701 1054 aaKnown RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 TCF15Q12870 199 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 TDGQ13569 410 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 ZBTB6Q15916 424 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 FOXD4L6Q3SYB3 417 aaPredicted RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 FOXD4L3Q6VB84 417 aaPredicted RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 SUGP1Q8IWZ8 645 aaKnown RBP20.67■□□□□ 0.9
SSH3-209ENST00000532600 IKZF4Q9H2S9 585 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 PIDD1Q9HB75 910 aa20.67■□□□□ 0.9
SSH3-209ENST00000532600 H0YCG3 227 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 CCL16O15467 120 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 NARSO43776 548 aaKnown RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 TRAK2O60296 914 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 HNRNPA1P09651 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
SSH3-209ENST00000532600 PDIA4P13667 645 aaKnown RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 RPL9P32969 192 aaKnown RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 GTF2BQ00403 316 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 MRPL58Q14197 206 aaKnown RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 VARS2Q5ST30 1063 aaKnown RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 AXDND1Q5T1B0 1012 aaPredicted RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 GRASPQ7Z6J2 395 aaPredicted RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 ST13P5Q8NFI4 369 aaPredicted RBP20.66■□□□□ 0.9
SSH3-209ENST00000532600 SLC7A14Q8TBB6 771 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 STAMQ92783 540 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 BICD1Q96G01 975 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 DUSP12Q9UNI6 340 aa20.66■□□□□ 0.9
SSH3-209ENST00000532600 PIEZO1Q92508 2521 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 MYH15Q9Y2K3 1946 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 A0A087X0B3 334 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 A0A0B4J269 797 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 TISP43B9A030 160 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 ANKRD63C9JTQ0 380 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 TRAPPC3O43617 180 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 ADRB2P07550 413 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 CLTAP09496 248 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 LAMP2P13473 410 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 HOXA9P31269 272 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 LIG4P49917 911 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 ENOX2Q16206 610 aaKnown RBP20.65■□□□□ 0.9
SSH3-209ENST00000532600 ZC2HC1CQ53FD0 456 aaPredicted RBP20.65■□□□□ 0.9
SSH3-209ENST00000532600 PPM1LQ5SGD2 360 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 LIN9Q5TKA1 542 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 ANKS3Q6ZW76 656 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 GET4Q7L5D6 327 aaPredicted RBP20.65■□□□□ 0.9
SSH3-209ENST00000532600 TMEM105Q8N8V8 129 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 RASSF8Q8NHQ8 419 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 SUSD3Q96L08 255 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 PLEKHA5Q9HAU0 1116 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 HCFC1R1Q9NWW0 138 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 IGSF9Q9P2J2 1179 aa20.65■□□□□ 0.9
SSH3-209ENST00000532600 MORC2Q9Y6X9 1032 aaPredicted RBP20.65■□□□□ 0.9
SSH3-209ENST00000532600 WDR27A2RRH5 827 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 MYMKA6NI61 221 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 LACTBL1A8MY62 500 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 ANHXE9PGG2 379 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 HNRNPDLO14979 420 aaKnown RBP20.64■□□□□ 0.89
SSH3-209ENST00000532600 KRT18P05783 430 aaKnown RBP20.64■□□□□ 0.89
SSH3-209ENST00000532600 ROR1Q01973 937 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 SLC39A14Q15043 492 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 ITFG1Q8TB96 612 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 PHOX2BQ99453 314 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 ZHX3Q9H4I2 956 aa20.64■□□□□ 0.89
SSH3-209ENST00000532600 TFIP11Q9UBB9 837 aaKnown RBP20.64■□□□□ 0.89
SSH3-209ENST00000532600 ANK1P16157 1881 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 SYN3O14994 580 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 OGTO15294 1046 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 TBCAO75347 108 aaKnown RBP20.63■□□□□ 0.89
SSH3-209ENST00000532600 ABLIM3O94929 683 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 POU2F2P09086 479 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 NPR3P17342 541 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 FSHRP23945 695 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 LRPAP1P30533 357 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 MATR3P43243 847 aaKnown RBP eCLIP20.63■□□□□ 0.89
SSH3-209ENST00000532600 HTR4Q13639 388 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 CWF19L1Q69YN2 538 aaKnown RBP20.63■□□□□ 0.89
SSH3-209ENST00000532600 POTEHQ6S545 545 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 DYMQ7RTS9 669 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 SFR1Q86XK3 245 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 SLC44A3Q8N4M1 653 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 STRA6Q9BX79 667 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms