RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 SYCP1Q15431 976 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 EXOC3L4Q17RC7 722 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 PSRC1Q6PGN9 363 aaPredicted RBP19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 OTOP2Q7RTS6 562 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 FBXL13Q8NEE6 735 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 LMO3Q8TAP4 145 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 CXorf38Q8TB03 319 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 HELQQ8TDG4 1101 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 TAS1R2Q8TE23 839 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 C18orf25Q96B23 403 aaPredicted RBP19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 DPP3Q9NY33 737 aa19.4■□□□□ 0.7
PPP1CA-208ENST00000532446 HOXA2O43364 376 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 XPOTO43592 962 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 HLA-DRAP01903 254 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 AMHP03971 560 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 THP07101 528 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 CYP3A5P20815 502 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 CDC25BP30305 580 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 GUCY2FP51841 1108 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 NAB2Q15742 525 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 SCARA3Q6AZY7 606 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 VSTM4Q8IW00 320 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 SEMA4DQ92854 862 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 TOP1MTQ969P6 601 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■□□□□ 8.3
PPP1CA-208ENST00000532446 SLC38A7Q9NVC3 462 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 RAB20Q9NX57 234 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 GCNT4Q9P109 453 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 TUBGCP4Q9UGJ1 667 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 SIX4Q9UIU6 781 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 INPP5FQ9Y2H2 1132 aa19.39■□□□□ 0.69
PPP1CA-208ENST00000532446 PHACTR2O75167 634 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 SLC9A1P19634 815 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 PON1P27169 355 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 DEFB103AP81534 67 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 SOX4Q06945 474 aaPredicted RBP19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 GRIK3Q13003 919 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 NCOA4Q13772 614 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 DPY19L2P1Q6NXN4 242 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 TMEM130Q8N3G9 435 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 EHBP1Q8NDI1 1231 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 RSPH1Q8WYR4 309 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 ITGA11Q9UKX5 1188 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 SCN1AP35498 2009 aa19.38■□□□□ 0.69
PPP1CA-208ENST00000532446 ITIH6Q6UXX5 1313 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 LRRN2O75325 713 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 CST3P01034 146 aaPredicted RBP19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 POMCP01189 267 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 ITGB3P05106 788 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 PIK3CAP42336 1068 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 KLK7P49862 253 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 TRIM65Q6PJ69 517 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 ABI1Q8IZP0 508 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 URGCPQ8TCY9 931 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 HERVK_113Q902F9 699 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 CASD1Q96PB1 797 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 INTS2Q9H0H0 1204 aaKnown RBP19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 PRO3102Q9H379 93 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 KANSL3Q9P2N6 904 aa19.37■□□□□ 0.69
PPP1CA-208ENST00000532446 COL4A6Q14031 1691 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 DGKIO75912 1065 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 UPP2O95045 317 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 LRPAP1P30533 357 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 KCNJ6P48051 423 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 GATMP50440 423 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 SPECC1LQ69YQ0 1117 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 LSM14BQ9BX40 385 aaKnown RBP19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 GOLGA2P5Q9HBQ8 144 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 SIX2Q9NPC8 291 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 PLCB1Q9NQ66 1216 aa19.36■□□□□ 0.69
PPP1CA-208ENST00000532446 ANO9A1A5B4 782 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 ZBBXA8MT70 800 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 POLR2BP30876 1174 aaKnown RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 RBP5P82980 135 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 TRPC3Q13507 836 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 PCMTD1Q96MG8 357 aaPredicted RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 XYLT2Q9H1B5 865 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 TBC1D13Q9NVG8 400 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 CXXC1Q9P0U4 656 aaPredicted RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 ZC3H11AO75152 810 aaKnown RBP eCLIP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 NOL4O94818 638 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 ASS1P00966 412 aaKnown RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 KRT19P08727 400 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 MAGEA10P43363 369 aaPredicted RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 MYL6P60660 151 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 APBA1Q02410 837 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 TUSC3Q13454 348 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 SGSM1Q2NKQ1 1148 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 C9orf57Q5W0N0 161 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 TMC6Q7Z403 805 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 PI4K2AQ9BTU6 479 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 FAM207AQ9NSI2 230 aaPredicted RBP19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 AGAP1Q9UPQ3 857 aa19.35■□□□□ 0.69
PPP1CA-208ENST00000532446 TBKBP1A7MCY6 615 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms