RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 FGFR3P22607 806 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 PPP2R3AQ06190 1150 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 PNOCQ13519 176 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 LEXMQ3ZCV2 418 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 RTP2Q5QGT7 225 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 SCARA3Q6AZY7 606 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 JADE1Q6IE81 842 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 BRSK2Q8IWQ3 736 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 C12orf56Q8IXR9 622 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 IPO9Q96P70 1041 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 FAM213AQ9BRX8 229 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 UBQLN1Q9UMX0 589 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 DERAQ9Y315 318 aa15.15■□□□□ 0.02
TSPAN4-220ENST00000532375 PLXNA3P51805 1871 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 VCANP13611 3396 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 MTCL1Q9Y4B5 1905 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 H3BQ06 376 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 PODXLO00592 558 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 LDHAP00338 332 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 KCNA5P22460 613 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 BRCC3P46736 316 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 GLUD2P49448 558 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 KCNQ1P51787 676 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 SNRPFP62306 86 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 MRPS5P82675 430 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 USP41Q3LFD5 358 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 FAM171A1Q5VUB5 890 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 ARMCX5Q6P1M9 558 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 CXorf38Q8TB03 319 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 PPP2R3CQ969Q6 453 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 MRPL17Q9NRX2 175 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 EXOC1Q9NV70 894 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 DMAC2Q9NW81 257 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 HSPBP1Q9NZL4 362 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 C2CD2Q9Y426 696 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 HCFC2Q9Y5Z7 792 aa15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 SF3B1O75533 1304 aaKnown RBP eCLIP15.14■□□□□ 0.01
TSPAN4-220ENST00000532375 I3L4J1 428 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 PIRO00625 290 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 PPEF2O14830 753 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 CLIC2O15247 247 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 TEX28O15482 410 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.018e-6■■■■■ 52.4
TSPAN4-220ENST00000532375 SYCE2Q6PIF2 218 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 GPD1LQ8N335 351 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 FAM84AQ96KN4 292 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 FNIP2Q9P278 1114 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 BARX2Q9UMQ3 279 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
TSPAN4-220ENST00000532375 C2CD2LO14523 706 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 TBC1D4O60343 1298 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 IL18RAPO95256 599 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 URODP06132 367 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 EPCAMP16422 314 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 MRPL58Q14197 206 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 TMEM132DQ14C87 1099 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 LILRA6Q6PI73 481 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 PRSS55Q6UWB4 352 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 RSPO2Q6UXX9 243 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 FEZF2Q8TBJ5 459 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 RIN2Q8WYP3 895 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 BORCS6Q96GS4 357 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 SUSD3Q96L08 255 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 CLSTN3Q9BQT9 956 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 TTPALQ9BTX7 342 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 S1PR5Q9H228 398 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 PDE11AQ9HCR9 933 aa15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-220ENST00000532375 CUL9Q8IWT3 2517 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 C5orf42Q9H799 3197 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 GRXCR2A6NFK2 248 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 PDXKO00764 312 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 SPTLC1O15269 473 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 ADAM12O43184 909 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 PRPF40AO75400 957 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 RPL17P18621 184 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 TKTP29401 623 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 CLCN4P51793 760 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 UBE2HP62256 183 aa15.11■□□□□ 0.01
TSPAN4-220ENST00000532375 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms