RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 SF3B1O75533 1304 aaKnown RBP eCLIP12.81□□□□□ -0.366e-6■■■■■ 56.4
PPFIA1-220ENST00000532024 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
PPFIA1-220ENST00000532024 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 H3BNC9 293 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 TMEM189-UBE2V1I3L0A0 370 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 PODXLO00592 558 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 LPXNO60711 386 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 AKAP3O75969 853 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 B3GAT3O94766 335 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 PBX3P40426 434 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 PNPLA4P41247 253 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 CASP4P49662 377 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 VAMP7P51809 220 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 PMS1P54277 932 aaKnown RBP12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 STX17P56962 302 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 TYRO3Q06418 890 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 SPAG1Q07617 926 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 BFSP1Q12934 665 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 NAB2Q15742 525 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ZBTB6Q15916 424 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ZC3H3Q8IXZ2 948 aaKnown RBP12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 KLHL23Q8NBE8 558 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ZSWIM2Q8NEG5 633 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 C18orf25Q96B23 403 aaPredicted RBP12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 IGSF21Q96ID5 467 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 DPP3Q9NY33 737 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 TUBGCP4Q9UGJ1 667 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
PPFIA1-220ENST00000532024 LAMA2P24043 3122 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 NT5C1B-RDH14C9J2C7 533 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 IKBKBO14920 756 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 MEFVO15553 781 aaPredicted RBP12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 B4GALT3O60512 393 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 PHACTR2O75167 634 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 LRPAP1P30533 357 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 CLCNKBP51801 687 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 BIRC3Q13489 604 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 UPP1Q16831 310 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 PDE12Q6L8Q7 609 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 PARD3BQ8TEW8 1205 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 TTYH1Q9H313 450 aaPredicted RBP12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
PPFIA1-220ENST00000532024 ANK1P16157 1881 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 SYCE3A1L190 88 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 CLSTN1O94985 981 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 KIF4AO95239 1232 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 CAVIN2O95810 425 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 ITGB1P05556 798 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 KRT19P08727 400 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 MYO1EQ12965 1108 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 TRPC3Q13507 836 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 SV2CQ496J9 727 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 DCAF17Q5H9S7 520 aaPredicted RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 PDXDC1Q6P996 788 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 TLR9Q9NR96 1032 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 TRIP11Q15643 1979 aa12.78□□□□□ -0.36
PPFIA1-220ENST00000532024 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 ITGB3P05106 788 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 URODP06132 367 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 GTF2H1P32780 548 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 TAF6P49848 677 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 CLDN10P78369 228 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 RBP5P82980 135 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 MYL5Q02045 173 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 CREMQ03060 361 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 CETN1Q12798 172 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms