RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 USP11P51784 963 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PRKAA2P54646 552 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 DDR1Q08345 913 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ALG11Q2TAA5 492 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 KBTBD12Q3ZCT8 623 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 BMP2KLQ5H9B9 411 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF697Q5TEC3 545 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 IFFO2Q5TF58 517 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 CEP135Q66GS9 1140 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 OLFM4Q6UX06 510 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PXKQ7Z7A4 578 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 VPS52Q8N1B4 723 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 DEPDC1BQ8WUY9 529 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TBC1D5Q92609 795 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 CCDC114Q96M63 670 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TWNKQ96RR1 684 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF395Q9H8N7 513 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 C5AR2Q9P296 337 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TBX20Q9UMR3 447 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 GPR55Q9Y2T6 319 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 A0A1W2PNR3 127 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 PODXLO00592 558 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 WNT9AO14904 365 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 VILLO15195 856 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CCP110O43303 1012 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MSCO60682 206 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 KINO60870 393 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 FERP16591 822 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 AKT1P31749 480 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 GBP1P32455 592 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.58e-7■■■■■ 31.9
ECHDC1-222ENST00000531967 SLC5A3P53794 718 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 GBE1Q04446 702 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 C3orf36Q3SXR2 165 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CT83Q5H943 113 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MBNL2Q5VZF2 373 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 BBS12Q6ZW61 710 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CPLX4Q7Z7G2 160 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ARMC8Q8IUR7 673 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CYP2W1Q8TAV3 490 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 TBC1D22AQ8WUA7 517 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CDCA5Q96FF9 252 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 POP1Q99575 1024 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CCDC94Q9BW85 323 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 TCF7L2Q9NQB0 619 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CPNE7Q9UBL6 633 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 EXTL2Q9UBQ6 330 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MORF4L1Q9UBU8 362 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 SMARCA4P51532 1647 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 H0YAE9 185 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 DVL2O14641 736 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 RTN2O75298 545 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 E2F6O75461 281 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 S1PR4O95977 384 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 KITP10721 976 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 HSPA5P11021 654 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 TOP1P11387 765 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 PTPN2P17706 415 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 TGM1P22735 817 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ST5P78524 1137 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ATP11AP98196 1134 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 RELBQ01201 579 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 C19orf57Q0VDD7 668 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 FGL2Q14314 439 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 PUM1Q14671 1186 aaKnown RBP eCLIP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 RAB30Q15771 203 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 TBCEQ15813 527 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 GEN1Q17RS7 908 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 KRBOX4Q5JUW0 171 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MTFR2Q6P444 385 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 BORAQ6PGQ7 559 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 FBXO38Q6PIJ6 1188 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MCATQ8IVS2 390 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ADSSL1Q8N142 457 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 C10orf53Q8N6V4 93 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CEP76Q8TAP6 659 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 ATP6V0A1Q93050 837 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 RGMAQ96B86 450 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 NEIL1Q96FI4 390 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MMADHCQ9H3L0 296 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 MROH8Q9H579 483 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 GPR27Q9NS67 375 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 HOOK1Q9UJC3 728 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 UNC13AQ9UPW8 1703 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 LMTK3Q96Q04 1460 aa5.68□□□□□ -1.5
ECHDC1-222ENST00000531967 CCDC169A6NNP5 214 aa5.67□□□□□ -1.5
ECHDC1-222ENST00000531967 PTGES3LE9PB15 166 aa5.67□□□□□ -1.5
ECHDC1-222ENST00000531967 MCF2LO15068 1137 aa5.67□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF862O60290 1169 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms