RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 MRPL17Q9NRX2 175 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 TBC1D7Q9P0N9 293 aa11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 AGO2Q9UKV8 859 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 C2CD2Q9Y426 696 aa11.77□□□□□ -0.53
GPATCH4-216ENST00000531900 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 LACTBL1A8MY62 500 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 TISP43B9A030 160 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 ZNF202O95125 648 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 URODP06132 367 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 CNPP09543 421 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 HARSP12081 509 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 FGFR3P22607 806 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 AFMP43652 599 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 CREMQ03060 361 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 PPP2R3AQ06190 1150 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 SNW1Q13573 536 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 SEZ6Q53EL9 994 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 ZBTB41Q5SVQ8 909 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 KRBA2Q6ZNG9 492 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 ELOA2Q8IYF1 753 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 FMR1NBQ8N0W7 255 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 TMEM87AQ8NBN3 555 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 HDAC7Q8WUI4 952 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 SCFD1Q8WVM8 642 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 PIK3R5Q8WYR1 880 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 CASP10Q92851 521 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 KLHL5Q96PQ7 755 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 EMILIN2Q9BXX0 1053 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 BLZF1Q9H2G9 400 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 GOLPH3LQ9H4A5 285 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 RAPGEFL1Q9UHV5 662 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 USP15Q9Y4E8 981 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
GPATCH4-216ENST00000531900 TGFB1I1O43294 461 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 XPOTO43592 962 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 B3GAT3O94766 335 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 CASP1P29466 404 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 CA8P35219 290 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 CLCN4P51793 760 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 DPYDQ12882 1025 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 SYCE2Q6PIF2 218 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 C12orf56Q8IXR9 622 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 C3orf58Q8NDZ4 430 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 SUSD6Q92537 303 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 HPS3Q969F9 1004 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 FAM122AQ96E09 287 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 TTPALQ9BTX7 342 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 PHF7Q9BWX1 381 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 RHOBTB2Q9BYZ6 727 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 S1PR5Q9H228 398 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 IKZF4Q9H2S9 585 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 C11orf16Q9NQ32 467 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 CHMP5Q9NZZ3 219 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 CACNG4Q9UBN1 327 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 SCN1AP35498 2009 aa11.75□□□□□ -0.53
GPATCH4-216ENST00000531900 PODXLO00592 558 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 SYN3O14994 580 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 TEX28O15482 410 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 EXTL3O43909 919 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 IL18RAPO95256 599 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 ADH1AP07327 375 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 IGFBP6P24592 240 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 ANP32AP39687 249 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 ACOT2P49753 483 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 STK4Q13043 487 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 KCNB1Q14721 858 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 RTP2Q5QGT7 225 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 KIAA1841Q6NSI8 718 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 LLGL2Q6P1M3 1020 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 LILRA6Q6PI73 481 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms