RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 DDX3XO00571 662 aaKnown RBP eCLIP3.65□□□□□ -1.83
CD44-234ENST00000531873 DAPK3O43293 454 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 IL18RAPO95256 599 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 GASTP01350 101 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 GYPEP15421 78 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 SUMO3P55854 103 aaPredicted RBP3.65□□□□□ -1.83
CD44-234ENST00000531873 DLG4P78352 724 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 TNFAIP2Q03169 654 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 HGFACQ04756 655 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 EXOSC9Q06265 439 aaKnown RBP3.65□□□□□ -1.83
CD44-234ENST00000531873 TRIM14Q14142 442 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 ACAP1Q15027 740 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 HSP90AB4PQ58FF6 505 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 EMC10Q5UCC4 262 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 KLHDC7AQ5VTJ3 777 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 SAPCD2Q86UD0 394 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 MDM1Q8TC05 714 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 BRIX1Q8TDN6 353 aaKnown RBP3.65□□□□□ -1.83
CD44-234ENST00000531873 STON2Q8WXE9 905 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 CEP95Q96GE4 821 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 P2RX7Q99572 595 aaKnown RBP3.65□□□□□ -1.83
CD44-234ENST00000531873 COLEC11Q9BWP8 271 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 OR10A2Q9H208 303 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 ARFGAP3Q9NP61 516 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 PNPLA8Q9NP80 782 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 TMEM140Q9NV12 185 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 SLC23A1Q9UHI7 598 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 OGDHLQ9ULD0 1010 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 RUVBL1Q9Y265 456 aaKnown RBP3.65□□□□□ -1.83
CD44-234ENST00000531873 PCDHGB3Q9Y5G1 929 aa3.65□□□□□ -1.83
CD44-234ENST00000531873 ZMYM3Q14202 1370 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 FGF18O76093 207 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 ADRB1P08588 477 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 VSIG10L2P0DP72 767 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 HDCP19113 662 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SLC6A4P31645 630 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 CASRP41180 1078 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 PIK3CGP48736 1102 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 MEOX1P50221 254 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 ADCY7P51828 1080 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SOX8P57073 446 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 BPIFB4P59827 614 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 DUSP2Q05923 314 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SP140Q13342 867 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SLC35G1Q2M3R5 365 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 C3orf38Q5JPI3 329 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 KHDC1LQ5JSQ8 128 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 MFSD14BQ5SR56 506 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 AFMIDQ63HM1 303 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 TMEM132EQ6IEE7 984 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 CCDC174Q6PII3 467 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 MYLK4Q86YV6 388 aaPredicted RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 ANKRD53Q8N9V6 530 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 GIMAP8Q8ND71 665 aaPredicted RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 KBTBD7Q8WVZ9 684 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 BRI3BPQ8WY22 251 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 GCDHQ92947 438 aaPredicted RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 LPPQ93052 612 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 NMD3Q96D46 503 aaKnown RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 MBD6Q96DN6 1003 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SIGLEC10Q96LC7 697 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 GPHA2Q96T91 129 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 MYOCQ99972 504 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 C11orf54Q9H0W9 315 aaPredicted RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 L2HGDHQ9H9P8 463 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SMURF2Q9HAU4 748 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 ZNF287Q9HBT7 754 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SARS2Q9NP81 518 aaKnown RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 GNL3LQ9NVN8 582 aaKnown RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 PIH1D1Q9NWS0 290 aaKnown RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 SIDT1Q9NXL6 827 aaKnown RBP3.64□□□□□ -1.83
CD44-234ENST00000531873 ADAM29Q9UKF5 820 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 FAM184BQ9ULE4 1060 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 LRCH1Q9Y2L9 728 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 MED16Q9Y2X0 877 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 KAT6BQ8WYB5 2073 aa3.64□□□□□ -1.83
CD44-234ENST00000531873 SH3D21A4FU49 640 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 TRIM43BA6NCK2 446 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 APOL1O14791 398 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 GRM6O15303 877 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 ABHD16AO95870 558 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 PARP1P09874 1014 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 HARSP12081 509 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 IL2RBP14784 551 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 VEGFAP15692 232 aaPredicted RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 SMARCA1P28370 1054 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 PDIA3P30101 505 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 PTPN7P35236 360 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 CHKAP35790 457 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 HSPA7P48741 367 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 RPS16P62249 146 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 ATP2C1P98194 919 aaPredicted RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 USP10Q14694 798 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 SSPNQ14714 243 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 MPEG1Q2M385 716 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 GAGE13Q4V321 117 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 CCDC93Q567U6 631 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 DACT2Q5SW24 774 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 OTUD7BQ6GQQ9 843 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 TLDC1Q6P9B6 456 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms