RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 INO80BQ9C086 356 aaPredicted RBP6.52□□□□□ -1.37
CASP4-210ENST00000531546 PCIF1Q9H4Z3 704 aa6.52□□□□□ -1.37
CASP4-210ENST00000531546 ROCK2O75116 1388 aaKnown RBP6.52□□□□□ -1.37
CASP4-210ENST00000531546 FAM221BA6H8Z2 402 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 HNRNPLP14866 589 aaKnown RBP eCLIP6.51□□□□□ -1.37
CASP4-210ENST00000531546 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 GLCCI1Q86VQ1 547 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 GLB1L3Q8NCI6 653 aaPredicted RBP6.51□□□□□ -1.37
CASP4-210ENST00000531546 SCLYQ96I15 445 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 CPPED1Q9BRF8 314 aaPredicted RBP6.51□□□□□ -1.37
CASP4-210ENST00000531546 KCNH6Q9H252 994 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 SNTG2Q9NY99 539 aa6.51□□□□□ -1.37
CASP4-210ENST00000531546 KDM6AO15550 1401 aaPredicted RBP6.5□□□□□ -1.37
CASP4-210ENST00000531546 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 TCRBV16S1A1N1A0A5B0 115 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 CA12O43570 354 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 CYP17A1P05093 508 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 RFC4P35249 363 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 BRAPQ7Z569 592 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 NELL1Q92832 810 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 UIMC1Q96RL1 719 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 THSD7BQ9C0I4 1608 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 TTC21BQ7Z4L5 1316 aa6.5□□□□□ -1.37
CASP4-210ENST00000531546 STC2O76061 302 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 FSBPO95073 299 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 ZFP36P26651 326 aaKnown RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 ZEB1P37275 1124 aaPredicted RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 CLK3P49761 638 aaKnown RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 ERCC6LQ2NKX8 1250 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
CASP4-210ENST00000531546 CNTROBQ8N137 903 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 LCORLQ8N3X6 602 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 MRPL4Q9BYD3 311 aaKnown RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 SERHL2Q9H4I8 314 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 TAF1DQ9H5J8 278 aaPredicted RBP6.49□□□□□ -1.37
CASP4-210ENST00000531546 TRIOBPQ9H2D6 2365 aa6.49□□□□□ -1.37
CASP4-210ENST00000531546 DICER1Q9UPY3 1922 aaKnown RBP6.48□□□□□ -1.37
CASP4-210ENST00000531546 ITGB4P16144 1822 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 TONSLQ96HA7 1378 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 CCDC163A0A0D9SF12 145 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 SOGA3Q5TF21 947 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 DDX53Q86TM3 631 aaKnown RBP6.48□□□□□ -1.37
CASP4-210ENST00000531546 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 MKL1Q969V6 931 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 DCLRE1CQ96SD1 692 aaKnown RBP6.48□□□□□ -1.37
CASP4-210ENST00000531546 ZNF768Q9H5H4 540 aaKnown RBP6.48□□□□□ -1.37
CASP4-210ENST00000531546 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 MEGF6O75095 1541 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 RGPD2P0DJD1 1756 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 FAM208AQ9UK61 1670 aaKnown RBP6.48□□□□□ -1.37
CASP4-210ENST00000531546 SCN4AP35499 1836 aa6.48□□□□□ -1.37
CASP4-210ENST00000531546 CENPFP49454 3210 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 UNC80Q8N2C7 3258 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 TMEM200CA6NKL6 621 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 AHRRA9YTQ3 701 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 RNASET2O00584 256 aaKnown RBP6.47□□□□□ -1.37
CASP4-210ENST00000531546 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
CASP4-210ENST00000531546 ERBB2P04626 1255 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 GYS1P13807 737 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 MECP2P51608 486 aaKnown RBP6.47□□□□□ -1.37
CASP4-210ENST00000531546 WNT3AP56704 352 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 MYBPC3Q14896 1274 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 EPHA7Q15375 998 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 ZNF174Q15697 407 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 FAM214AQ32MH5 1076 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 ARHGEF19Q8IW93 802 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 OR52N2Q8NGI0 321 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 COQ10AQ96MF6 247 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 PUS7Q96PZ0 661 aaKnown RBP6.47□□□□□ -1.37
CASP4-210ENST00000531546 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
CASP4-210ENST00000531546 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 NDC1Q9BTX1 674 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 R3HDMLQ9H3Y0 253 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.47□□□□□ -1.37
CASP4-210ENST00000531546 TTC21AQ8NDW8 1320 aa6.47□□□□□ -1.37
CASP4-210ENST00000531546 SBNO2Q9Y2G9 1366 aa6.46□□□□□ -1.37
CASP4-210ENST00000531546 ADAMTS7Q9UKP4 1686 aa6.46□□□□□ -1.37
CASP4-210ENST00000531546 B4E1Z4 1266 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 H7C1D1 291 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 LPXNO60711 386 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 DNAJC6O75061 913 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 MAP2K2P36507 400 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 ADCY1Q08828 1119 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 ITPK1Q13572 414 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 CCDC62Q6P9F0 684 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 GDF7Q7Z4P5 450 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 CHST14Q8NCH0 376 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 RAPGEF4Q8WZA2 1011 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 TRPM7Q96QT4 1865 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 WDR11Q9BZH6 1224 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 DDX21Q9NR30 783 aaKnown RBP eCLIP6.46□□□□□ -1.38
CASP4-210ENST00000531546 TRPM5Q9NZQ8 1165 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 ANKFY1Q9P2R3 1169 aa6.46□□□□□ -1.38
CASP4-210ENST00000531546 HACL1Q9UJ83 578 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms