RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ARMC5Q96C12 935 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 ACAP3Q96P50 834 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 SPAG5Q96R06 1193 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 TRAIPQ9BWF2 469 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 IMPG2Q9BZV3 1241 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-228ENST00000531007 SENP6Q9GZR1 1112 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-228ENST00000531007 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 INTS2Q9H0H0 1204 aaKnown RBP10.65□□□□□ -0.7
CTNND1-228ENST00000531007 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 UNC93B1Q9H1C4 597 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 GANQ9H2C0 597 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 RAB20Q9NX57 234 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 C2CD2Q9Y426 696 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 CDY2AQ9Y6F7 541 aa10.65□□□□□ -0.7
CTNND1-228ENST00000531007 FRMPD3Q5JV73 1810 aa10.65□□□□□ -0.71
CTNND1-228ENST00000531007 SSU72P8A0A1W2PR75 194 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 TLR3O15455 904 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 XPOTO43592 962 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF500O60304 480 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 IPO7O95373 1038 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 TNNC2P02585 160 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 C4BPAP04003 597 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 STAG3L1P0CL83 205 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 SLC9A1P19634 815 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 TBXAS1P24557 533 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 STAT1P42224 750 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 CDK7P50613 346 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 RAB27AP51159 221 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 MFAP3P55082 362 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 POLR2FP61218 127 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 DLG4P78352 724 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF200P98182 395 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 GCNT1Q02742 428 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 BFSP2Q13515 415 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 SFMBT2Q5VUG0 894 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 EEF1DP3Q658K8 133 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 PDXDC1Q6P996 788 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 RRAGAQ7L523 313 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 LMO3Q8TAP4 145 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 PLEKHO2Q8TD55 490 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 BAP1Q92560 729 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 ABHD8Q96I13 439 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 NT5C1BQ96P26 610 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 CRACR2AQ9BSW2 395 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
CTNND1-228ENST00000531007 GINS2Q9Y248 185 aa10.64□□□□□ -0.71
CTNND1-228ENST00000531007 GFPT2O94808 682 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 SGPL1O95470 568 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 SERPING1P05155 500 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 TMEM191BP0C7N4 346 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 FERP16591 822 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 ATICP31939 592 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 THPOP40225 353 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 PRKCIP41743 596 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 KLK7P49862 253 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 JAM2P57087 298 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 KRT83P78385 493 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 LRMPQ12912 555 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 ENOX2Q16206 610 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 SGSM1Q2NKQ1 1148 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 DPY19L2P1Q6NXN4 242 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 VPS36Q86VN1 386 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 THNSL1Q8IYQ7 743 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 TTC39CQ8N584 583 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 FAM160A2Q8N612 972 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 ZSWIM2Q8NEG5 633 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 CPB2Q96IY4 423 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF333Q96JL9 665 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 DEFB118Q96PH6 123 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 PDE11AQ9HCR9 933 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 SIX2Q9NPC8 291 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 UBN1Q9NPG3 1134 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 C1orf112Q9NSG2 853 aa10.63□□□□□ -0.71
CTNND1-228ENST00000531007 PIN4Q9Y237 131 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 R3HCC1Q9Y3T6 440 aaKnown RBP10.63□□□□□ -0.71
CTNND1-228ENST00000531007 LRRC53A6NM62 1247 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 KIF2AO00139 706 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-228ENST00000531007 PHACTR2O75167 634 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 CHRNA1P02708 482 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 CCDC175P0C221 793 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 PAK2Q13177 524 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 BIRC3Q13489 604 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 TRPC3Q13507 836 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ASIC2Q16515 512 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 PTPN21Q16825 1174 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 XKR4Q5GH76 650 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 FBXO47Q5MNV8 452 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms