RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CLDN3O15551 220 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 NTHL1P78549 312 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 VARS2Q5ST30 1063 aaKnown RBP22.83■■□□□ 1.25
SMPD1-204ENST00000530395 RSPO2Q6UXX9 243 aaPredicted RBP22.83■■□□□ 1.25
SMPD1-204ENST00000530395 MTSS1LQ765P7 747 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 BRAPQ7Z569 592 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 RASSF8Q8NHQ8 419 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 TBC1D32Q96NH3 1257 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 ODF2LQ9ULJ1 636 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 CA14Q9ULX7 337 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 VPS13AQ96RL7 3174 aa22.83■■□□□ 1.25
SMPD1-204ENST00000530395 H7C4K7 107 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 SCP2P22307 547 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 NCKAP1LP55160 1127 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 CACNB1Q02641 598 aaPredicted RBP22.82■■□□□ 1.24
SMPD1-204ENST00000530395 MCL1Q07820 350 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 SLC8B1Q6J4K2 584 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 CCDC105Q8IYK2 499 aa22.82■■□□□ 1.24
SMPD1-204ENST00000530395 C18orf25Q96B23 403 aaPredicted RBP22.82■■□□□ 1.24
SMPD1-204ENST00000530395 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.82■■□□□ 1.24
SMPD1-204ENST00000530395 NPHP3-ACAD11A0A0J9YXS1 232 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 GFRA3O60609 400 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 ELF1P32519 619 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 ROR1Q01973 937 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 PABPC1LQ4VXU2 614 aaKnown RBP22.81■■□□□ 1.24
SMPD1-204ENST00000530395 GPBP1Q86WP2 473 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 ZNF461Q8TAF7 563 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 GPR152Q8TDT2 470 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 FGF13Q92913 245 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 SLC2A4RGQ9NR83 387 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 KCNH3Q9ULD8 1083 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 NOTCH4Q99466 2003 aa22.81■■□□□ 1.24
SMPD1-204ENST00000530395 KRBA1A5PL33 1030 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 PI15O43692 258 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 FAM13AO94988 1023 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 LRG1P02750 347 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 KRT18P05783 430 aaKnown RBP22.8■■□□□ 1.24
SMPD1-204ENST00000530395 CLTAP09496 248 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 MCM4P33991 863 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 LONP1P36776 959 aaKnown RBP22.8■■□□□ 1.24
SMPD1-204ENST00000530395 LIG4P49917 911 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 SLC10A6Q3KNW5 377 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 SEZ6Q53EL9 994 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 ARSHQ5FYA8 562 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 HAUS6Q7Z4H7 955 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 APPL2Q8NEU8 664 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 FGF14Q92915 247 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 REEP2Q9BRK0 252 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 PLEKHA5Q9HAU0 1116 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 ARHGEF3Q9NR81 526 aa22.8■■□□□ 1.24
SMPD1-204ENST00000530395 PROB1E7EW31 1015 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 PRRG1O14668 218 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 CXCL8P10145 99 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 DHX8Q14562 1220 aaKnown RBP22.79■■□□□ 1.24
SMPD1-204ENST00000530395 KYAT1Q16773 422 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 ZNF280DQ6N043 979 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 PARM1Q6UWI2 310 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 MYCT1Q8N699 235 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 DTWD2Q8NBA8 298 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 ITFG1Q8TB96 612 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 KCNN1Q92952 543 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 SUSD3Q96L08 255 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 TBC1D17Q9HA65 648 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 PARVGQ9HBI0 331 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 HCFC1R1Q9NWW0 138 aa22.79■■□□□ 1.24
SMPD1-204ENST00000530395 DNMT3BQ9UBC3 853 aaKnown RBP22.79■■□□□ 1.24
SMPD1-204ENST00000530395 MRPS23Q9Y3D9 190 aaKnown RBP22.79■■□□□ 1.24
SMPD1-204ENST00000530395 ARHGEF37A1IGU5 675 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 WDR27A2RRH5 827 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 K7ENM7 598 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 HNRNPDLO14979 420 aaKnown RBP22.78■■□□□ 1.24
SMPD1-204ENST00000530395 MEFVO15553 781 aaPredicted RBP22.78■■□□□ 1.24
SMPD1-204ENST00000530395 ABLIM3O94929 683 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 NBL1P41271 181 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 ARPP19P56211 112 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 PPP2R3AQ06190 1150 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 CTXN3Q4LDR2 81 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 ST13P5Q8NFI4 369 aaPredicted RBP22.78■■□□□ 1.24
SMPD1-204ENST00000530395 TUBGCP4Q9UGJ1 667 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 CFAP54Q96N23 3096 aa22.78■■□□□ 1.24
SMPD1-204ENST00000530395 VPS37CA5D8V6 355 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 XPOTO43592 962 aaKnown RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 TBCAO75347 108 aaKnown RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 ATF2P15336 505 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 PLCG1P19174 1290 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 PDCP20941 246 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 MARCKSP29966 332 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 ABCD1P33897 745 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 MRPL58Q14197 206 aaKnown RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 KARSQ15046 597 aaKnown RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 SF3A1Q15459 793 aaKnown RBP22.77■■□□□ 1.24
SMPD1-204ENST00000530395 TPGS2Q68CL5 300 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 PHLDB3Q6NSJ2 640 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 NPAS3Q8IXF0 933 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 RAD54LQ92698 747 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 KIF12Q96FN5 646 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 CYP4F11Q9HBI6 524 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 FBXL5Q9UKA1 691 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 TBX20Q9UMR3 447 aa22.77■■□□□ 1.24
SMPD1-204ENST00000530395 UBQLN1Q9UMX0 589 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms