RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 C16orf59Q7L2K0 433 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 TRAPPC11Q7Z392 1133 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 MRPL10Q7Z7H8 261 aaKnown RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 ASB7Q9H672 318 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 C1orf112Q9NSG2 853 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 DPP3Q9NY33 737 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 SIK3Q9Y2K2 1263 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 B4GALT3O60512 393 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ZNF623O75123 536 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PON1P27169 355 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PBX1P40424 430 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 CLDN10P78369 228 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PPIGQ13427 754 aaKnown RBP eCLIP11.49□□□□□ -0.57
SOX6-213ENST00000530378 NCOA4Q13772 614 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 SURF1Q15526 300 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ZACNQ401N2 412 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 EPC2Q52LR7 807 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 SPECC1LQ69YQ0 1117 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 GLB1LQ6UWU2 654 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ALKAL1Q6UXT8 129 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ARHGEF19Q8IW93 802 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 GSTCDQ8NEC7 633 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PGBD4Q96DM1 585 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ERGIC2Q96RQ1 377 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 TRAIPQ9BWF2 469 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PCDHB7Q9Y5E2 793 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 CST3P01034 146 aaPredicted RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 SKIP12755 728 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 TRIM21P19474 475 aaKnown RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 IGFBP6P24592 240 aaPredicted RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 MYL6P60660 151 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 TRPC3Q13507 836 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 ARID5BQ14865 1188 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 KAT5Q92993 513 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
SOX6-213ENST00000530378 PAAF1Q9BRP4 392 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 TMEM161AQ9NX61 479 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 CXXC1Q9P0U4 656 aaPredicted RBP11.49□□□□□ -0.57
SOX6-213ENST00000530378 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 GIT1Q9Y2X7 761 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 C2CD2Q9Y426 696 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
SOX6-213ENST00000530378 TBKBP1A7MCY6 615 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 F8W810 466 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 RNF225M0QZC1 329 aaPredicted RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 OFD1O75665 1012 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 PNMA6AP0CW24 399 aaPredicted RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 KCNE1P15382 129 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 GTF2H1P32780 548 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 KCNJ6P48051 423 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 FAM189BP81408 668 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 CETN1Q12798 172 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 RAPGEF1Q13905 1077 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 BEST2Q8NFU1 509 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 NEK11Q8NG66 645 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 HASPINQ8TF76 798 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 TATDN2Q93075 761 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 PPP1R10Q96QC0 940 aaKnown RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 ARID3AQ99856 593 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 LBHD1Q9BQE6 289 aaPredicted RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 RAB20Q9NX57 234 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 UBQLN1Q9UMX0 589 aaKnown RBP11.48□□□□□ -0.57
SOX6-213ENST00000530378 POLIQ9UNA4 740 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
SOX6-213ENST00000530378 KIAA1671Q9BY89 1806 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 A0A1W2PQC6 194 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 NOL4O94818 638 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 EOMESO95936 686 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 GYPCP04921 128 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 THP07101 528 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 CDC25BP30305 580 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 CASP14P31944 242 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 PBX3P40426 434 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
SOX6-213ENST00000530378 RNASELQ05823 741 aaKnown RBP11.47□□□□□ -0.57
SOX6-213ENST00000530378 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 XKR4Q5GH76 650 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 NOMO2Q5JPE7 1267 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 ZNF280BQ86YH2 543 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms