RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 KRT7P08729 469 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 ITIH2P19823 946 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 KLRC1P26715 233 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 MAGEA4P43358 317 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 ALCAMQ13740 583 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 CHI3L2Q15782 390 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 PID1Q7Z2X4 250 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 SH3RF3Q8TEJ3 882 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-223ENST00000529986 PGBD4Q96DM1 585 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 BBS2Q9BXC9 721 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 GCOM2Q9BZD3 368 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-223ENST00000529986 HEY2Q9UBP5 337 aa8.02□□□□□ -1.12
CTNND1-223ENST00000529986 MROH7-TTC4A0A0A0MT08 1334 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 PRR23D1E9PI22 279 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 PRR23D2P0DMB1 279 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 NMT1P30419 496 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ACTR2P61160 394 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 TBL3Q12788 808 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 C3orf62Q6ZUJ4 267 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 NLRP10Q86W26 655 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ARID3BQ8IVW6 561 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 MMGT1Q8N4V1 131 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 LZICQ8WZA0 190 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 DBNDD1Q9H9R9 158 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ZC3H7BQ9UGR2 993 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 PHTF1Q9UMS5 762 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 E5RI56 91 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ATP9AO75110 1047 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 TSC22D2O75157 780 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 OTUD4Q01804 1114 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 DPYDQ12882 1025 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 CCDC142Q17RM4 750 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 C16orf89Q6UX73 402 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ISLR2Q6UXK2 745 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 SENP7Q9BQF6 1050 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 L2HGDHQ9H9P8 463 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 RAB6BQ9NRW1 208 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 RTN2O75298 545 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 UBOX5O94941 541 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 WEE2P0C1S8 567 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 KCNQ4P56696 695 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ZNF200P98182 395 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 RIN3Q8TB24 985 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 VPS50Q96JG6 964 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ERP44Q9BS26 406 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 AIPL1Q9NZN9 384 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 HERC5Q9UII4 1024 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 SRP72O76094 671 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 IFNA8P32881 189 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 PRELPP51888 382 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ATP1A4Q13733 1029 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 TRIM25Q14258 630 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 SLFN12LQ6IEE8 588 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 ADSSL1Q8N142 457 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 CNDP1Q96KN2 507 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 C10orf88Q9H8K7 445 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 METTL5Q9NRN9 209 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 DDX18Q9NVP1 670 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
CTNND1-223ENST00000529986 L1RE1Q9UN81 338 aa8.02□□□□□ -1.13
CTNND1-223ENST00000529986 UTYO14607 1347 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PFASO15067 1338 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 AP1G2O75843 785 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PYGLP06737 847 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SLC9A1P19634 815 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 HOXA7P31268 230 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 DEFA1P59665 94 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 DEFA3P59666 94 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 STK4Q13043 487 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 KPNB1Q14974 876 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 IL31Q6EBC2 164 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PPHLN1Q8NEY8 458 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.01□□□□□ -1.133e-6■■■■■ 50.8
CTNND1-223ENST00000529986 CASP10Q92851 521 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CMTM5Q96DZ9 223 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 SMAD5Q99717 465 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 MAD2L2Q9UI95 211 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CDV3Q9UKY7 258 aaKnown RBP8.01□□□□□ -1.13
CTNND1-223ENST00000529986 ITIH6Q6UXX5 1313 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 PTPRMP28827 1452 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 MYO3AQ8NEV4 1616 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 KLHL2O95198 593 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 NUDT2P50583 147 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 CACNB3P54284 484 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 KCNMA1Q12791 1236 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 IZUMO2Q6UXV1 221 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 DSTYKQ6XUX3 929 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 BNIPLQ7Z465 357 aa8.01□□□□□ -1.13
CTNND1-223ENST00000529986 GPR141Q7Z602 305 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms