RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ALDH7A1P49419 539 aaKnown RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 PSMD6Q15008 389 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 FOXR2Q6PJQ5 311 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 C11orf57Q6ZUT1 292 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 FAM186BQ8IYM0 893 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 ARNTL2Q8WYA1 636 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 LRFN3Q9BTN0 628 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 GZF1Q9H116 711 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 PRG3Q9Y2Y8 225 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 DERAQ9Y315 318 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 RWDD3Q9Y3V2 267 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 BDP1A6H8Y1 2624 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 CHD9Q3L8U1 2897 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 EPOPA6NHQ4 379 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 ALDH2P05091 517 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 DLATP10515 647 aaKnown RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 BMP1P13497 986 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 IGFBP4P22692 258 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 ERCC5P28715 1186 aaPredicted RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 CLCNKBP51801 687 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 ZSCAN23Q3MJ62 389 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 SPATA1Q5VX52 437 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 TMEM173Q86WV6 379 aaPredicted RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 SLC39A11Q8N1S5 342 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 CSGALNACT2Q8N6G5 542 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 BCL7CQ8WUZ0 217 aaPredicted RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 TSPAN18Q96SJ8 248 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 EPHX3Q9H6B9 360 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 MARCH5Q9NX47 278 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 FAN1Q9Y2M0 1017 aa15.17■□□□□ 0.02
USF1-209ENST00000529476 ARIH1Q9Y4X5 557 aaPredicted RBP15.17■□□□□ 0.02
USF1-209ENST00000529476 C5orf67F2Z3F1 127 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 RFXAPO00287 272 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 MAPK13O15264 365 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 SLC16A3O15427 465 aaKnown RBP15.16■□□□□ 0.02
USF1-209ENST00000529476 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
USF1-209ENST00000529476 CYP3A5P20815 502 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 IGFBP6P24592 240 aaPredicted RBP15.16■□□□□ 0.02
USF1-209ENST00000529476 DLG4P78352 724 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 SURF1Q15526 300 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 UPP1Q16831 310 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 OR5B17Q8NGF7 314 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 PARD3BQ8TEW8 1205 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 BORCS6Q96GS4 357 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 CEP63Q96MT8 703 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 UROC1Q96N76 676 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 FNBP1Q96RU3 617 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 CGRRF1Q99675 332 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 FUCA2Q9BTY2 467 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
USF1-209ENST00000529476 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 INTS13Q9NVM9 706 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 SPG21Q9NZD8 308 aa15.16■□□□□ 0.02
USF1-209ENST00000529476 LRRIQ3A6PVS8 624 aaPredicted RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 PODXLO00592 558 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 XPOTO43592 962 aaKnown RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 FGF18O76093 207 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 KIF4AO95239 1232 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 ITGB1P05556 798 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 RB1P06400 928 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 TMEM191BP0C7N4 346 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 TNNI1P19237 187 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 LRPAP1P30533 357 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 VAMP7P51809 220 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 GPM6BQ13491 265 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 ANO6Q4KMQ2 910 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 CT47A1Q5JQC4 288 aaPredicted RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 SCARA3Q6AZY7 606 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 FILIP1Q7Z7B0 1213 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 WDR49Q8IV35 697 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 C3orf58Q8NDZ4 430 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 TMC2Q8TDI7 906 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 CACTINQ8WUQ7 758 aaKnown RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 ZNF516Q92618 1163 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 C11orf84Q9BUA3 381 aaPredicted RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 COLEC11Q9BWP8 271 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 MTMR12Q9C0I1 747 aa15.15■□□□□ 0.02
USF1-209ENST00000529476 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
USF1-209ENST00000529476 DPP3Q9NY33 737 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms