RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 PTPRJQ12913 1337 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 LRRC10BA6NIK2 292 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 TMEM189-UBE2V1I3L0A0 370 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 DDHD2O94830 711 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 AFPP02771 609 aaKnown RBP12.69□□□□□ -0.38
C9orf135-207ENST00000529446 C4BPAP04003 597 aaKnown RBP12.69□□□□□ -0.38
C9orf135-207ENST00000529446 PPM1AP35813 382 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 PNPLA4P41247 253 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
C9orf135-207ENST00000529446 MXI1P50539 228 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 WNT7BP56706 349 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 RBP5P82980 135 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 C1orf220Q5T0J3 134 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 C15orf39Q6ZRI6 1047 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 LUZP1Q86V48 1076 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 LRRC52Q8N7C0 313 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 C18orf25Q96B23 403 aaPredicted RBP12.69□□□□□ -0.38
C9orf135-207ENST00000529446 ZNF560Q96MR9 790 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 ZNF558Q96NG5 402 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 HSD3B7Q9H2F3 369 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 CWH43Q9H720 699 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
C9orf135-207ENST00000529446 MRPL42Q9Y6G3 142 aaKnown RBP12.69□□□□□ -0.38
C9orf135-207ENST00000529446 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 GTPBP10A4D1E9 387 aaKnown RBP12.68□□□□□ -0.38
C9orf135-207ENST00000529446 PIRO00625 290 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 PHACTR2O75167 634 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
C9orf135-207ENST00000529446 RB1P06400 928 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 ATICP31939 592 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 GCLMP48507 274 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 FMO5P49326 533 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 BCAR1P56945 870 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 DLG4P78352 724 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 PPP3CAQ08209 521 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 UPP1Q16831 310 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 VWA3BQ502W6 1294 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
C9orf135-207ENST00000529446 C9orf57Q5W0N0 161 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 C1orf127Q8N9H9 656 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 OR5B17Q8NGF7 314 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 ZNF516Q92618 1163 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 TAF4BQ92750 862 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
C9orf135-207ENST00000529446 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 TUBGCP4Q9UGJ1 667 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 FAN1Q9Y2M0 1017 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
C9orf135-207ENST00000529446 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
C9orf135-207ENST00000529446 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 PODXLO00592 558 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 NRP1O14786 923 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 ZC3H11AO75152 810 aaKnown RBP eCLIP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 ITGB3P05106 788 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 CA3P07451 260 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 GALTP07902 379 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 OR1G1P47890 313 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 RABGGTBP53611 331 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 BIRC3Q13489 604 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 TRPC3Q13507 836 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 KRT31Q15323 416 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 SV2CQ496J9 727 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 FILIP1LQ4L180 1135 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 LMBRD2Q68DH5 695 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 FAM109BQ6ICB4 259 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 KCNT2Q6UVM3 1135 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 CREBRFQ8IUR6 639 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 COLGALT1Q8NBJ5 622 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 CCDC150Q8NCX0 1101 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 FBXL13Q8NEE6 735 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 CXorf38Q8TB03 319 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 FAXDC2Q96IV6 333 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 PBX4Q9BYU1 374 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 IMPG2Q9BZV3 1241 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 VRTNQ9H8Y1 702 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 COLQQ9Y215 455 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 ANK1P16157 1881 aa12.67□□□□□ -0.38
C9orf135-207ENST00000529446 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
C9orf135-207ENST00000529446 TMEM265A0A087WTH1 108 aa12.66□□□□□ -0.38
C9orf135-207ENST00000529446 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms