RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GTF2BQ00403 316 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 HERC4Q5GLZ8 1057 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF697Q5TEC3 545 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC27A1Q6PCB7 646 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 HS2ST1Q7LGA3 356 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF720Q7Z2F6 126 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CDR2LQ86X02 465 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM178BQ8IXR5 827 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CMTR2Q8IYT2 770 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CEP57L1Q8IYX8 460 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 FSIP1Q8NA03 581 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SMG8Q8ND04 991 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC17A8Q8NDX2 589 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 MNS1Q8NEH6 495 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 MRPS27Q92552 414 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ALKBH8Q96BT7 664 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PAGE5Q96GU1 130 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CASD1Q96PB1 797 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 KCNK17Q96T54 332 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ACO2Q99798 780 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 STRA6Q9BX79 667 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 EIF2AQ9BY44 585 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TMEM117Q9H0C3 514 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 GOLPH3LQ9H4A5 285 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ST6GALNAC4Q9H4F1 302 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ZHX3Q9H4I2 956 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SRA1Q9HD15 236 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PTPRHQ9HD43 1115 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PANK4Q9NVE7 773 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SEL1LQ9UBV2 794 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TNFSF13BQ9Y275 285 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 USP20Q9Y2K6 914 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CNTNAP2Q9UHC6 1331 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 MICAL3Q7RTP6 2002 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 GOLGA6L4A6NEF3 574 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 GOLGA8CPA6NN73 597 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 MEIS3P2A8K0S8 358 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 N4BP3O15049 544 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 CBFA2T2O43439 604 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 OFD1O75665 1012 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 FGFR1P11362 822 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 VDRP11473 427 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 IDEP14735 1019 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 GAP43P17677 238 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 PROZP22891 400 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 NMT1P30419 496 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 AFMP43652 599 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 GATMP50440 423 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 ERVK-21P61565 698 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 PTK2Q05397 1052 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 STRN3Q13033 797 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 SNW1Q13573 536 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 BTG3Q14201 252 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 HSP90B2PQ58FF3 399 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 CLLU1OSQ5K130 101 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 MFSD4BQ5TF39 518 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 ATF7IP2Q5U623 682 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 EEF1DP3Q658K8 133 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 AGMOQ6ZNB7 445 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 CLEC17AQ6ZS10 378 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 LRRC55Q6ZSA7 311 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 Q7L0L9 218 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 SFR1Q86XK3 245 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 CCDC65Q8IXS2 484 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 DEFB123Q8N688 67 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 RNF169Q8NCN4 708 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 ENGASEQ8NFI3 743 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 LPPQ93052 612 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 TGS1Q96RS0 853 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 SRPK1Q96SB4 655 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM129BQ96TA1 746 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 TARS2Q9BW92 718 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 MRPL4Q9BYD3 311 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 TRIM6Q9C030 488 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 PDZD7Q9H5P4 517 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 CXorf56Q9H5V9 222 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 UBN1Q9NPG3 1134 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 OLFML3Q9NRN5 406 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 MTMR10Q9NXD2 777 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 TBX20Q9UMR3 447 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 IPPQ9Y573 584 aa6.84□□□□□ -1.31
ATPAF1-209ENST00000529214 TCHHQ07283 1943 aa6.84□□□□□ -1.32
ATPAF1-209ENST00000529214 PTPRSQ13332 1948 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 PVALEFA0A1B0GWK0 134 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 CCDC189A1A4V9 331 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 ERICH4A6NGS2 130 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 TBKBP1A7MCY6 615 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 K7ENM7 598 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 ABLIM1O14639 778 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 TOM1L1O75674 476 aa6.83□□□□□ -1.32
ATPAF1-209ENST00000529214 NPTXRO95502 500 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms