RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SMAD5Q99717 465 aaKnown RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 RHOBTB2Q9BYZ6 727 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 CDH19Q9H159 772 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 GREM2Q9H772 168 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 AGO3Q9H9G7 860 aaKnown RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 TLR9Q9NR96 1032 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 ADGRB1O14514 1584 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 ADGRB2O60241 1585 aa6.21□□□□□ -1.42
CSDE1-212ENST00000529046 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.21□□□□□ -1.42
CSDE1-212ENST00000529046 RAB3GAP2Q9H2M9 1393 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 MARF1Q9Y4F3 1742 aaKnown RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 FZD7O75084 574 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 RFPL1O75677 317 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 LTA4HP09960 611 aaKnown RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 VSIG10L2P0DP72 767 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 OSMP13725 252 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 CTSSP25774 331 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 MCAMP43121 646 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 ADKP55263 362 aaKnown RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 BPIFB4P59827 614 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 TCIRG1Q13488 830 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 SAFB2Q14151 953 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 MST1LQ2TV78 715 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 LMBR1LQ6UX01 489 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 Q8N1X5 172 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 LILRA3Q8N6C8 439 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 ANKRD53Q8N9V6 530 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 NUP88Q99567 741 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 RTFDC1Q9BY42 306 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 ACE2Q9BYF1 805 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-212ENST00000529046 POGKQ9P215 609 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 MRFAP1Q9Y605 127 aa6.2□□□□□ -1.42
CSDE1-212ENST00000529046 NDUFS2O75306 463 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 HSP90B1P14625 803 aaKnown RBP6.19□□□□□ -1.42
CSDE1-212ENST00000529046 ACRV1P26436 265 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 HIBADHP31937 336 aaKnown RBP6.19□□□□□ -1.42
CSDE1-212ENST00000529046 RAB27AP51159 221 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 MGAT5Q09328 741 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 MGAT2Q10469 447 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 ACAP1Q15027 740 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 USP51Q70EK9 711 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 SGMS1Q86VZ5 419 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 MSL3Q8N5Y2 521 aaKnown RBP6.19□□□□□ -1.42
CSDE1-212ENST00000529046 SNX33Q8WV41 574 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 EXTL1Q92935 676 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 RPL10LQ96L21 214 aaKnown RBP6.19□□□□□ -1.42
CSDE1-212ENST00000529046 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 ZNF341Q9BYN7 854 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 RALGAPBQ86X10 1494 aa6.19□□□□□ -1.42
CSDE1-212ENST00000529046 GPRASP1Q5JY77 1395 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 USP32Q8NFA0 1604 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 BLMP54132 1417 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-212ENST00000529046 EP400Q96L91 3159 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 CAPN14A8MX76 684 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 CYP27B1O15528 508 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 DAPK3O43293 454 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 TOX4O94842 621 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 JUNP05412 331 aaKnown RBP6.18□□□□□ -1.42
CSDE1-212ENST00000529046 CDK17Q00537 523 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 FOXE3Q13461 319 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 UBE3CQ15386 1083 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 MUM1L1Q5H9M0 696 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 ABHD15Q6UXT9 468 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 C1orf210Q8IVY1 113 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 GPR156Q8NFN8 814 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 SCAND2PQ9GZW5 306 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-212ENST00000529046 RBM12Q9NTZ6 932 aaKnown RBP6.18□□□□□ -1.42
CSDE1-212ENST00000529046 KLHL42Q9P2K6 505 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 RPTORQ8N122 1335 aa6.18□□□□□ -1.42
CSDE1-212ENST00000529046 NWD2Q9ULI1 1742 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 TULP4Q9NRJ4 1543 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 PHF2O75151 1096 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 ALDH1A2O94788 518 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 GASTP01350 101 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 MIIPQ5JXC2 388 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 KRT40Q6A162 431 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 COA7Q96BR5 231 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 SLC2A13Q96QE2 648 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 UIMC1Q96RL1 719 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 CSRNP2Q9H175 543 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 PNMA8BQ9ULN7 279 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-212ENST00000529046 GIT1Q9Y2X7 761 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 IPPQ9Y573 584 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 GLI3P10071 1580 aa6.17□□□□□ -1.42
CSDE1-212ENST00000529046 POLR3AO14802 1390 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-212ENST00000529046 BRD4O60885 1362 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-212ENST00000529046 CYR61O00622 381 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
CSDE1-212ENST00000529046 EDNRBP24530 442 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 ACVRL1P37023 503 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 PTH1RQ03431 593 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 Q6ZVL8 140 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 KRT27Q7Z3Y8 459 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-212ENST00000529046 JDP2Q8WYK2 163 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 RIN2Q8WYP3 895 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms