RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	BBOF1	Q8ND07	529 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZNF516	Q92618	1163 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	HERPUD2	Q9BSE4	406 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	TRIM7	Q9C029	511 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	VPS33B	Q9H267	617 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	GABBR1	Q9UBS5	961 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	WDR81	Q562E7	1941 aa		24.93	■■□□□ 1.58
GSDMD-208	ENST00000528475	EXTL3	O43909	919 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	ACSL3	O95573	720 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	PSMD6	Q15008	389 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	SNCB	Q16143	134 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	TRIM72	Q6ZMU5	477 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	DEFB132	Q7Z7B7	95 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	RELL1	Q8IUW5	271 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	KCNN1	Q92952	543 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	FAM213A	Q9BRX8	229 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	MTFR1L	Q9H019	292 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	CCDC113	Q9H0I3	377 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	ARHGAP28	Q9P2N2	729 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	SNX3	O60493	162 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	NSF	P46459	744 aa	Known RBP	24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	CCNG2	Q16589	344 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZACN	Q401N2	412 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	CCDC38	Q502W7	563 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	VSTM1	Q6UX27	236 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	TAS1R3	Q7RTX0	852 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	TRPM8	Q7Z2W7	1104 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATG4A	Q8WYN0	398 aa		24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZKSCAN4	Q969J2	545 aa	Predicted RBP	24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	CTDP1	Q9Y5B0	961 aa	Predicted RBP	24.92	■■□□□ 1.58
GSDMD-208	ENST00000528475	UMODL1	Q5DID0	1318 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	WNT10B	O00744	389 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	WDR44	Q5JSH3	913 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	FBXO41	Q8TF61	875 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	CPA5	Q8WXQ8	436 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	ELMO3	Q96BJ8	720 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	VCPIP1	Q96JH7	1222 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	XPNPEP1	Q9NQW7	623 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	LGALS13	Q9UHV8	139 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	KCNG1	Q9UIX4	513 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	ANAPC5	Q9UJX4	755 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	FER1L6	Q2WGJ9	1857 aa		24.91	■■□□□ 1.58
GSDMD-208	ENST00000528475	MGRN1	O60291	552 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	IFNAR2	P48551	515 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	LIN9	Q5TKA1	542 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	TTLL6	Q8N841	843 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	TMEM120B	A0PK00	339 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATP2C2	O75185	946 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	CALCA	P01258	141 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	C4BPA	P04003	597 aa	Known RBP	24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	PSAP	P07602	524 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	SOX10	P56693	466 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	LLGL1	Q15334	1064 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	NBPF9	Q3BBW0	867 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	PPP1R2P3	Q6NXS1	205 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	RHOT1	Q8IXI2	618 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	KATNAL2	Q8IYT4	538 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	IFT74	Q96LB3	600 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	CD248	Q9HCU0	757 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZNF277	Q9NRM2	450 aa	Predicted RBP	24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	NINJ2	Q9NZG7	142 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	ZNRF3	Q9ULT6	936 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	STYXL1	Q9Y6J8	313 aa		24.9	■■□□□ 1.58
GSDMD-208	ENST00000528475	KCNA2	P16389	499 aa		24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	GSC	P56915	257 aa	Predicted RBP	24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	BICD1	Q96G01	975 aa		24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	SCLT1	Q96NL6	688 aa		24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	ATP6V0A4	Q9HBG4	840 aa		24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	R3HDM2	Q9Y2K5	976 aa	Known RBP	24.89	■■□□□ 1.58
GSDMD-208	ENST00000528475	NFASC	O94856	1347 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	HLA-DRA	P01903	254 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	NR3C2	P08235	984 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	ACO1	P21399	889 aa	Known RBP	24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	ADCY8	P40145	1251 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	CCDC89	Q8N998	374 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	FOXP3	Q9BZS1	431 aa		24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	MRPL47	Q9HD33	250 aa	Known RBP	24.89	■■□□□ 1.57
GSDMD-208	ENST00000528475	THAP12	O43422	761 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	RALA	P11233	206 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	RDX	P35241	583 aa	Known RBP	24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	DGKZ	Q13574	1117 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	BAAT	Q14032	418 aa	Predicted RBP	24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	KYNU	Q16719	465 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	CEP128	Q6ZU80	1094 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	DYDC1	Q8WWB3	177 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	CKAP2	Q8WWK9	683 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	TACO1	Q9BSH4	297 aa	Known RBP	24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	CYP26B1	Q9NR63	512 aa		24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	TPX2	Q9ULW0	747 aa	Known RBP	24.88	■■□□□ 1.57
GSDMD-208	ENST00000528475	VWA5A	O00534	786 aa		24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	PREPL	Q4J6C6	727 aa	Predicted RBP	24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	PHF13	Q86YI8	300 aa	Predicted RBP	24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	EXD1	Q8NHP7	514 aa		24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	TEPSIN	Q96N21	525 aa		24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	FNBP1	Q96RU3	617 aa		24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	RPAP3	Q9H6T3	665 aa	Predicted RBP	24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	RNF146	Q9NTX7	359 aa		24.87	■■□□□ 1.57
GSDMD-208	ENST00000528475	USP15	Q9Y4E8	981 aa	Predicted RBP	24.87	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms