RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 HTRA4P83105 476 aaPredicted RBP23.77■■□□□ 1.4
PACSIN3-205ENST00000528462 DSC1Q08554 894 aa23.77■■□□□ 1.4
PACSIN3-205ENST00000528462 NR1I3Q14994 352 aa23.77■■□□□ 1.4
PACSIN3-205ENST00000528462 C1orf127Q8N9H9 656 aa23.77■■□□□ 1.4
PACSIN3-205ENST00000528462 DPP3Q9NY33 737 aa23.77■■□□□ 1.4
PACSIN3-205ENST00000528462 POMCP01189 267 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 LRPAP1P30533 357 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 CETN1Q12798 172 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 C9orf50Q5SZB4 431 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 LRRC43Q8N309 656 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 C18orf25Q96B23 403 aaPredicted RBP23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 GRPEL1Q9HAV7 217 aa23.76■■□□□ 1.39
PACSIN3-205ENST00000528462 COL4A6Q14031 1691 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 ANO9A1A5B4 782 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 TPM3P06753 285 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 ATP2A2P16615 1042 aaKnown RBP23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 RPL9P32969 192 aaKnown RBP23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 MYL7Q01449 175 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 SOX4Q06945 474 aaPredicted RBP23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 TUSC3Q13454 348 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 FKBP15Q5T1M5 1219 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 HERC6Q8IVU3 1022 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 CMTR2Q8IYT2 770 aaKnown RBP23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 FBXL13Q8NEE6 735 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 IFNKQ9P0W0 207 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 TUBGCP4Q9UGJ1 667 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 SIX4Q9UIU6 781 aa23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 LAMA2P24043 3122 aaKnown RBP23.75■■□□□ 1.39
PACSIN3-205ENST00000528462 PES1O00541 588 aaKnown RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 CBFA2T2O43439 604 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 GATMP50440 423 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 BIRC3Q13489 604 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 SHHQ15465 462 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 FAM84AQ96KN4 292 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 RNPC3Q96LT9 517 aaKnown RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 UROC1Q96N76 676 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 ERGIC2Q96RQ1 377 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 UBE2OQ9C0C9 1292 aaKnown RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 INSL6Q9Y581 213 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 FNDC1Q4ZHG4 1894 aaPredicted RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 PTPRSQ13332 1948 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 TBKBP1A7MCY6 615 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 TULP1O00294 542 aaPredicted RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 AP5Z1O43299 807 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 VNN1O95497 513 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 UBXN1Q04323 297 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 NCOA4Q13772 614 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 EPC2Q52LR7 807 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 TMCO2Q7Z6W1 182 aaPredicted RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 TAS1R2Q8TE23 839 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 DDX27Q96GQ7 796 aaKnown RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 XPO4Q9C0E2 1151 aaKnown RBP23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 MMRN2Q9H8L6 949 aa23.74■■□□□ 1.39
PACSIN3-205ENST00000528462 A0A1W2PQC6 194 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 PIRO00625 290 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 MRE11P49959 708 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 RBP5P82980 135 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 RNASELQ05823 741 aaKnown RBP23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 EXOC3L4Q17RC7 722 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 C9orf57Q5W0N0 161 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 GBP6Q6ZN66 633 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 COLGALT2Q8IYK4 626 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 LRRC52Q8N7C0 313 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 LMO3Q8TAP4 145 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 YME1L1Q96TA2 773 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 RAD9AQ99638 391 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 RAB20Q9NX57 234 aa23.73■■□□□ 1.39
PACSIN3-205ENST00000528462 TDRD15B5MCY1 1934 aaKnown RBP23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 TEX33O43247 280 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 PHACTR2O75167 634 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 CAPN15O75808 1086 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 DDHD2O94830 711 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 STAU1O95793 577 aaKnown RBP23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 CST3P01034 146 aaPredicted RBP23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 ITGB3P05106 788 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 ATICP31939 592 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 MLLT1Q03111 559 aaPredicted RBP23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 UPP1Q16831 310 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 ZNF280BQ86YH2 543 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 TRIM5Q9C035 493 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 VRTNQ9H8Y1 702 aa23.72■■□□□ 1.39
PACSIN3-205ENST00000528462 CARNS1A5YM72 827 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 HLA-DRAP01903 254 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 PAX3P23760 479 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 GUCY2FP51841 1108 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 PLCB2Q00722 1185 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 TRPC3Q13507 836 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 FAM117BQ6P1L5 589 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 SP7Q8TDD2 431 aaPredicted RBP23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 TAF4BQ92750 862 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 TMEM175Q9BSA9 504 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 XYLT2Q9H1B5 865 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 NRDE2Q9H7Z3 1164 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 GOLGA2P5Q9HBQ8 144 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 GCNT4Q9P109 453 aa23.71■■□□□ 1.39
PACSIN3-205ENST00000528462 B4GALT3O60512 393 aa23.7■■□□□ 1.38
PACSIN3-205ENST00000528462 ZC3H11AO75152 810 aaKnown RBP eCLIP23.7■■□□□ 1.38
PACSIN3-205ENST00000528462 ASS1P00966 412 aaKnown RBP23.7■■□□□ 1.38
PACSIN3-205ENST00000528462 POLR2BP30876 1174 aaKnown RBP23.7■■□□□ 1.38
PACSIN3-205ENST00000528462 PBX1P40424 430 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms