RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 FAM171A1Q5VUB5 890 aa11.6□□□□□ -0.55
CPSF1-203ENST00000527916 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
CPSF1-203ENST00000527916 ASAP3Q8TDY4 903 aa11.6□□□□□ -0.55
CPSF1-203ENST00000527916 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
CPSF1-203ENST00000527916 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
CPSF1-203ENST00000527916 A0A1B0GUA9 196 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 CYP11B2P19099 503 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 AKAP5P24588 427 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 PMLP29590 882 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 PRPHP41219 470 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 CXCL12P48061 93 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 FAM187BQ17R55 369 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 IGSF22Q8N9C0 903 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 GSTCDQ8NEC7 633 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-203ENST00000527916 ING5Q8WYH8 240 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 IRF7Q92985 503 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 MCRS1Q96EZ8 462 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 CPB2Q96IY4 423 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 POLR3FQ9H1D9 316 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-203ENST00000527916 NXF3Q9H4D5 531 aaKnown RBP11.59□□□□□ -0.55
CPSF1-203ENST00000527916 LMAN1LQ9HAT1 526 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 HCFC1R1Q9NWW0 138 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
CPSF1-203ENST00000527916 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
CPSF1-203ENST00000527916 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
CPSF1-203ENST00000527916 A0A087WWV3 80 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 USO1O60763 962 aaKnown RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 RHOP08100 348 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 ARF4P18085 180 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 PTGDRQ13258 359 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 TUSC3Q13454 348 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 RAB33AQ14088 237 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 N4BP2L1Q5TBK1 243 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 CDCA2Q69YH5 1023 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 HASPINQ8TF76 798 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 FAM3CQ92520 227 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 TRMT61BQ9BVS5 477 aaKnown RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 PLA2G2FQ9BZM2 168 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 C2orf40Q9H1Z8 148 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 FZD8Q9H461 694 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 ZFP14Q9HCL3 533 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 PRMT7Q9NVM4 692 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-203ENST00000527916 KLK14Q9P0G3 267 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 LRWD1Q9UFC0 647 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
CPSF1-203ENST00000527916 ARHGEF35A5YM69 484 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 GDF9O60383 454 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 PROS1P07225 676 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 OR1D2P34982 312 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 NAMPTP43490 491 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 LIMK1P53667 647 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 AASDHQ4L235 1098 aaPredicted RBP11.57□□□□□ -0.56
CPSF1-203ENST00000527916 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 CEP68Q76N32 757 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 ZBTB8OSQ8IWT0 167 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 KCTD17Q8N5Z5 321 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 C12orf50Q8NA57 414 aaPredicted RBP11.57□□□□□ -0.56
CPSF1-203ENST00000527916 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 GPRC5CQ9NQ84 441 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 TRPV5Q9NQA5 729 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.57□□□□□ -0.56
CPSF1-203ENST00000527916 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 SPEGQ15772 3267 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 IGF2RP11717 2491 aa11.57□□□□□ -0.56
CPSF1-203ENST00000527916 SPAG17Q6Q759 2223 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 CASTOR2A6NHX0 329 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 SHISA7A6NL88 538 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 CHURC1-FNTBB4DL54 471 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 ZNF197O14709 1029 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 ADAM12O43184 909 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 B4GALT5O43286 388 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 HRO43593 1189 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 KIF4AO95239 1232 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 NPTXRO95502 500 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 LRG1P02750 347 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 THP07101 528 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 PTPN2P17706 415 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 CCT6AP40227 531 aaKnown RBP11.56□□□□□ -0.56
CPSF1-203ENST00000527916 FNTBP49356 437 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 SATB1Q01826 763 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 LRRC32Q14392 662 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 GRM2Q14416 872 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 NBR1Q14596 966 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 ACAP1Q15027 740 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 ECM1Q16610 540 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 C1orf228Q6PIY5 440 aa11.56□□□□□ -0.56
CPSF1-203ENST00000527916 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms