RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 VEPH1Q14D04 833 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 GPAT2Q6NUI2 795 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 TAS1R2Q8TE23 839 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 DCDC2CA8MYV0 355 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 PDGFRAP16234 1089 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 CDK17Q00537 523 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 BFSP2Q13515 415 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 COPS5Q92905 334 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 I3L4J1 428 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 SEC31AO94979 1220 aaKnown RBP15.98■□□□□ 0.15
USP47-207ENST00000527733 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
USP47-207ENST00000527733 PSEN2P49810 448 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 BCAR1P56945 870 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 WDR49Q8IV35 697 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 MAP4K3Q8IVH8 894 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 ELMOD1Q8N336 334 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 POP1Q99575 1024 aaKnown RBP15.98■□□□□ 0.15
USP47-207ENST00000527733 CRYBG1Q9Y4K1 1723 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CHRNA3P32297 505 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 BBS9Q3SYG4 887 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 FAM71BQ8TC56 605 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 MAF1Q9H063 256 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 PORCNQ9H237 461 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CCDC68Q9H2F9 335 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 DHX35Q9H5Z1 703 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 SNX24Q9Y343 169 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 OR1G1P47890 313 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 MRPS25P82663 173 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 DNAJB3Q8WWF6 145 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 DNAJC19Q96DA6 116 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CPB2Q96IY4 423 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 MED15Q96RN5 788 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 MCF2P10911 925 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CDH6P55285 790 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 NME3Q13232 169 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 EPC2Q52LR7 807 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 MGARPQ8TDB4 240 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 C12orf42Q96LP6 360 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 DDX47Q9H0S4 455 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 NAGPAQ9UK23 515 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 INTUQ9ULD6 942 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CRCPO75575 148 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 PNMA6AP0CW24 399 aaPredicted RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 ZBTB48P10074 688 aaPredicted RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 GRIK1P39086 918 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 B4GALNT4Q76KP1 1039 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 CCT6BQ92526 530 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 DHX38Q92620 1227 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 CFAP57Q96MR6 1250 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 NOC2LQ9Y3T9 749 aaKnown RBP15.97■□□□□ 0.15
USP47-207ENST00000527733 MRFAP1Q9Y605 127 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 SNCAIPQ9Y6H5 919 aa15.97■□□□□ 0.15
USP47-207ENST00000527733 BTBD19C9JJ37 291 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 CREB3O43889 395 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 NOL9Q5SY16 702 aaKnown RBP15.96■□□□□ 0.15
USP47-207ENST00000527733 ZNF410Q86VK4 478 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 KLC2Q9H0B6 622 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 A0A087X0T9 212 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 KLRC4O43908 158 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 FAM228BP0C875 321 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 SPATA31C1P0DKV0 1188 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 GARSP41250 739 aaKnown RBP15.96■□□□□ 0.15
USP47-207ENST00000527733 COG7P83436 770 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 CENPUQ71F23 418 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 SLC35C1Q96A29 364 aa15.96■□□□□ 0.15
USP47-207ENST00000527733 SP3Q02447 781 aa15.96■□□□□ 0.14
USP47-207ENST00000527733 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.14
USP47-207ENST00000527733 DCP1BQ8IZD4 617 aaKnown RBP15.96■□□□□ 0.14
USP47-207ENST00000527733 AFAP1L2Q8N4X5 818 aa15.96■□□□□ 0.14
USP47-207ENST00000527733 TRIM10Q9UDY6 481 aa15.96■□□□□ 0.14
USP47-207ENST00000527733 B3GAT3O94766 335 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 APOEP02649 317 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 ACADSBP45954 432 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 PDE1BQ01064 536 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 PIGHQ14442 188 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 CC2D1AQ6P1N0 951 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 RYBPQ8N488 228 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 HMX1Q9NP08 348 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 PRG3Q9Y2Y8 225 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 PIK3R2O00459 728 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 EGFRP00533 1210 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 PLEKP08567 350 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 CLCN6P51797 869 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 CDR2Q01850 454 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 SPATA4Q8NEY3 305 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 ABCB6Q9NP58 842 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 GTF3C4Q9UKN8 822 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 KIAA1257Q9ULG3 409 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 PCDHB7Q9Y5E2 793 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 CXCL8P10145 99 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 RALAP11233 206 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 XPAP23025 273 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 BRD2P25440 801 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms