RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 CCDC6Q16204 474 aa10.92□□□□□ -0.66
CAPN1-210ENST00000527699 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
CAPN1-210ENST00000527699 RSPO2Q6UXX9 243 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 NSUN7Q8NE18 718 aaKnown RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 GATA6Q92908 595 aa10.92□□□□□ -0.66
CAPN1-210ENST00000527699 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
CAPN1-210ENST00000527699 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 PRMT7Q9NVM4 692 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 DNMT3BQ9UBC3 853 aaKnown RBP10.92□□□□□ -0.66
CAPN1-210ENST00000527699 FBXW11Q9UKB1 542 aa10.92□□□□□ -0.66
CAPN1-210ENST00000527699 ANHXE9PGG2 379 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
CAPN1-210ENST00000527699 HARSP12081 509 aaKnown RBP10.91□□□□□ -0.66
CAPN1-210ENST00000527699 TKTP29401 623 aaKnown RBP10.91□□□□□ -0.66
CAPN1-210ENST00000527699 CLCNKBP51801 687 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 POU5F1BQ06416 359 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 ZNF252P-AS1Q0IIN9 211 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 C19orf57Q0VDD7 668 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 ST3GAL1Q11201 340 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 SIM2Q14190 667 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-210ENST00000527699 ECM1Q16610 540 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 CELF5Q8N6W0 485 aaKnown RBP10.91□□□□□ -0.66
CAPN1-210ENST00000527699 HDAC7Q8WUI4 952 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 FGF13Q92913 245 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 GTF3C6Q969F1 213 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 PLA2G2FQ9BZM2 168 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 FZD8Q9H461 694 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 CDH7Q9ULB5 785 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
CAPN1-210ENST00000527699 DMXL2Q8TDJ6 3036 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 FAM170BA6NMN3 283 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 CCT6AP40227 531 aaKnown RBP10.9□□□□□ -0.66
CAPN1-210ENST00000527699 NEK4P51957 841 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 CREMQ03060 361 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 ANKRD1Q15327 319 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 PCBP1Q15365 356 aaKnown RBP eCLIP10.9□□□□□ -0.66
CAPN1-210ENST00000527699 NAB2Q15742 525 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 MAPK6Q16659 721 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 COL28A1Q2UY09 1125 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 NT5DC1Q5TFE4 455 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 LARP1BQ659C4 914 aaKnown RBP10.9□□□□□ -0.66
CAPN1-210ENST00000527699 POTEHQ6S545 545 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 CYP26C1Q6V0L0 522 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 CEP120Q8N960 986 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 C3orf58Q8NDZ4 430 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 GLIS3Q8NEA6 775 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-210ENST00000527699 NACC1Q96RE7 527 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 ADPGKQ9BRR6 497 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 NFKBIZQ9BYH8 718 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 AKAP13Q12802 2813 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 SDK1Q7Z5N4 2213 aa10.9□□□□□ -0.66
CAPN1-210ENST00000527699 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 NRG2O14511 850 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 EPB41L2O43491 1005 aaKnown RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 XYLBO75191 536 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 B3GAT3O94766 335 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CEBPBP17676 345 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CYP11B2P19099 503 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CDR1P51861 262 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 LIMK1P53667 647 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 NRLP54845 237 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 STARD6P59095 220 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 GRM2Q14416 872 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 SF3A2Q15428 464 aaKnown RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 PABPC1LQ4VXU2 614 aaKnown RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 SEZ6Q53EL9 994 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 STPG1Q5TH74 334 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CD300LGQ6UXG3 332 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 MCPH1Q8NEM0 835 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 NXPE3Q969Y0 559 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 FAM126AQ9BYI3 521 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 CCDC113Q9H0I3 377 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 C2orf40Q9H1Z8 148 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 SLC2A4RGQ9NR83 387 aa10.89□□□□□ -0.67
CAPN1-210ENST00000527699 MRPS23Q9Y3D9 190 aaKnown RBP10.89□□□□□ -0.67
CAPN1-210ENST00000527699 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 E9PMD0 336 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 ACKR2O00590 384 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 TM4SF5O14894 197 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 RHOP08100 348 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 HNRNPA1P09651 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 OR52Z1P0C646 297 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 GJA1P17302 382 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms