RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 LMBRD2Q68DH5 695 aaPredicted RBP20.26■□□□□ 0.83
SMPD1-203ENST00000527275 SLC35F6Q8N357 371 aa20.26■□□□□ 0.83
SMPD1-203ENST00000527275 TET1Q8NFU7 2136 aa20.26■□□□□ 0.83
SMPD1-203ENST00000527275 JAKMIP2Q96AA8 810 aa20.26■□□□□ 0.83
SMPD1-203ENST00000527275 FBXL5Q9UKA1 691 aa20.26■□□□□ 0.83
SMPD1-203ENST00000527275 KRT86O43790 486 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 TNNI1P19237 187 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 CLDN10P78369 228 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 KYAT1Q16773 422 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 ASTE1Q2TB18 679 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-203ENST00000527275 SLC10A6Q3KNW5 377 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 TDRD12Q587J7 1177 aaKnown RBP20.25■□□□□ 0.83
SMPD1-203ENST00000527275 SIX2Q9NPC8 291 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 IPPQ9Y573 584 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 PCDHB2Q9Y5E7 798 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 FHOD1Q9Y613 1164 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 PTPRJQ12913 1337 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 RCCD1A6NED2 376 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 VAV2P52735 878 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
SMPD1-203ENST00000527275 SPAG5Q96R06 1193 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 ADAM2Q99965 735 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 CCDC94Q9BW85 323 aaPredicted RBP20.25■□□□□ 0.83
SMPD1-203ENST00000527275 APOL6Q9BWW8 343 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 LACRTQ9GZZ8 138 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 FAM105AQ9NUU6 356 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 PCDHA13Q9Y5I0 950 aa20.25■□□□□ 0.83
SMPD1-203ENST00000527275 AKAP5P24588 427 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 ENPEPQ07075 957 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 DSC3Q14574 896 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 ASIC2Q16515 512 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 COL13A1Q5TAT6 717 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-203ENST00000527275 ZNF516Q92618 1163 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 TMEM117Q9H0C3 514 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 MYO6Q9UM54 1294 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 CITO14578 2027 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 ARID5AQ03989 594 aa20.24■□□□□ 0.83
SMPD1-203ENST00000527275 PRDM5Q9NQX1 630 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-203ENST00000527275 SCN5AQ14524 2016 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 CTAGE9A4FU28 777 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 LACTBL1A8MY62 500 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
SMPD1-203ENST00000527275 KLHL30Q0D2K2 578 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 KIF5AQ12840 1032 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 NAA30Q147X3 362 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-203ENST00000527275 PLEKHG4Q58EX7 1191 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 SV2AQ7L0J3 742 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 DBF4BQ8NFT6 615 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 CXCL16Q9H2A7 254 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 ANK1P16157 1881 aa20.23■□□□□ 0.83
SMPD1-203ENST00000527275 RECQL4O94761 1208 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 MXI1P50539 228 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 GFPT1Q06210 699 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-203ENST00000527275 RTN4RL1Q86UN2 441 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-203ENST00000527275 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TRAIPQ9BWF2 469 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TSGA10Q9BZW7 698 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TRIP11Q15643 1979 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 A0A0U1RQF3 1178 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TRIM43BA6NCK2 446 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 IL18RAPO95256 599 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 ITGB8P26012 769 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 MAGEA1P43355 309 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 RBM10P98175 930 aaKnown RBP20.22■□□□□ 0.83
SMPD1-203ENST00000527275 MYL7Q01449 175 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 KRT39Q6A163 491 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 IRF2BP2Q7Z5L9 587 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 EFCAB13Q8IY85 973 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TRIM43Q96BQ3 446 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-203ENST00000527275 CGRRF1Q99675 332 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 NAPGQ99747 312 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TMEM8AQ9HCN3 771 aa20.22■□□□□ 0.83
SMPD1-203ENST00000527275 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 LRRN2O75325 713 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 GTF2H1P32780 548 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
SMPD1-203ENST00000527275 SURF1Q15526 300 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 GJB7Q6PEY0 223 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 DEFB128Q7Z7B8 93 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 EHBP1Q8NDI1 1231 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 ASB7Q9H672 318 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 KLK14Q9P0G3 267 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 PARP2Q9UGN5 583 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 DUSP10Q9Y6W6 482 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 NFICP08651 508 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-203ENST00000527275 TFAMQ00059 246 aaKnown RBP20.21■□□□□ 0.83
SMPD1-203ENST00000527275 C15orf39Q6ZRI6 1047 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 CARD6Q9BX69 1037 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 MTMR12Q9C0I1 747 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 INTS2Q9H0H0 1204 aaKnown RBP20.21■□□□□ 0.83
SMPD1-203ENST00000527275 PLEKHA5Q9HAU0 1116 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 RNF19AQ9NV58 838 aa20.21■□□□□ 0.83
SMPD1-203ENST00000527275 AJAP1Q9UKB5 411 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms