RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 GRM6O15303 877 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 VNN1O95497 513 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 ALDH2P05091 517 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 RPL13P26373 211 aaKnown RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 ENPEPQ07075 957 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 STIM1Q13586 685 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 GRIN2CQ14957 1233 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 STX1AQ16623 288 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 ANO6Q4KMQ2 910 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 TRIM59Q8IWR1 403 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 FAM186BQ8IYM0 893 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 KLHL23Q8NBE8 558 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 URGCPQ8TCY9 931 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 SLC35C1Q96A29 364 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 CCDC127Q96BQ5 260 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 IGSF21Q96ID5 467 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 TGS1Q96RS0 853 aaKnown RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 CGRRF1Q99675 332 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 GPR62Q9BZJ7 368 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 SLC28A3Q9HAS3 691 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 DPP3Q9NY33 737 aa11.67□□□□□ -0.54
NEDD8-205ENST00000527046 UBQLN1Q9UMX0 589 aaKnown RBP11.67□□□□□ -0.54
NEDD8-205ENST00000527046 VWA8A3KMH1 1905 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 BICDL2A1A5D9 508 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 H3BNC9 293 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TMEM189-UBE2V1I3L0A0 370 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 IKBKBO14920 756 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 SLC16A3O15427 465 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 LILRB3O75022 631 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 ZC3H11AO75152 810 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 KIF4AO95239 1232 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 RB1P06400 928 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 LAG3P18627 525 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 AARSP49588 968 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 VAMP7P51809 220 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 BFSP1Q12934 665 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 ADGRE1Q14246 886 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 CDKAL1Q5VV42 579 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TDRD10Q5VZ19 366 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 C9orf57Q5W0N0 161 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TRAPPC11Q7Z392 1133 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 FRMD5Q7Z6J6 570 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 NT5DC4Q86YG4 428 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 WDR49Q8IV35 697 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 NOC3LQ8WTT2 800 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 ELMO3Q96BJ8 720 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 ZNF558Q96NG5 402 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 RPS6KC1Q96S38 1066 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TSG101Q99816 390 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 PLVAPQ9BX97 442 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 ALG13Q9NP73 1137 aaKnown RBP11.66□□□□□ -0.54
NEDD8-205ENST00000527046 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 FAN1Q9Y2M0 1017 aa11.66□□□□□ -0.54
NEDD8-205ENST00000527046 TMEM265A0A087WTH1 108 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 FGF18O76093 207 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 DLATP10515 647 aaKnown RBP11.65□□□□□ -0.54
NEDD8-205ENST00000527046 ZNF18P17022 549 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 RPL9P32969 192 aaKnown RBP11.65□□□□□ -0.54
NEDD8-205ENST00000527046 BRCC3P46736 316 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 OR1G1P47890 313 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 ERVFC1P60507 584 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.54
NEDD8-205ENST00000527046 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-205ENST00000527046 SURF1Q15526 300 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 ZACNQ401N2 412 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 CBWD6Q4V339 395 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 CBWD3Q5JTY5 395 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 CBWD5Q5RIA9 395 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 SV2AQ7L0J3 742 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 Q7L0L9 218 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 LIMS2Q7Z4I7 341 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 LMO3Q8TAP4 145 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 SEMA4DQ92854 862 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 MTMR12Q9C0I1 747 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 XYLT2Q9H1B5 865 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-205ENST00000527046 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 CHD7Q9P2D1 2997 aa11.65□□□□□ -0.54
NEDD8-205ENST00000527046 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 I3L4J1 428 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms