RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TOR2AQ5JU69 321 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 Q8NA96 180 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSDE1-210ENST00000525878 PTCD3Q96EY7 689 aaKnown RBP5.75□□□□□ -1.49
CSDE1-210ENST00000525878 LDAHQ9H6V9 325 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 TMEM140Q9NV12 185 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 LRIT1Q9P2V4 623 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 HSFX1Q9UBD0 423 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 ACTL7AQ9Y615 435 aa5.75□□□□□ -1.49
CSDE1-210ENST00000525878 TEX33O43247 280 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 BRINP1O60477 761 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 GPR3P46089 330 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 SCAND1P57086 179 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 ATP8B2P98198 1209 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 MTM1Q13496 603 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 NOMO1Q15155 1222 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 KIAA0895LQ68EN5 471 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 FOXR2Q6PJQ5 311 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 UBR7Q8N806 425 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 ACTRT2Q8TDY3 377 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 ZNF384Q8TF68 577 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 NUP133Q8WUM0 1156 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 CYFIP2Q96F07 1278 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 MARS2Q96GW9 593 aaKnown RBP5.74□□□□□ -1.49
CSDE1-210ENST00000525878 KLK15Q9H2R5 256 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 TBX22Q9Y458 520 aa5.74□□□□□ -1.49
CSDE1-210ENST00000525878 ARHGEF17Q96PE2 2063 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-210ENST00000525878 AMY1AP04745 511 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 GSPT1P15170 499 aaKnown RBP5.73□□□□□ -1.49
CSDE1-210ENST00000525878 MTNR1BP49286 362 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 SRSF2Q01130 221 aaKnown RBP5.73□□□□□ -1.49
CSDE1-210ENST00000525878 SP5Q6BEB4 398 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-210ENST00000525878 UBE3BQ7Z3V4 1068 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 ARHGEF25Q86VW2 580 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 COLGALT2Q8IYK4 626 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 MED15Q96RN5 788 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 ADI1Q9BV57 179 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 CAAP1Q9H8G2 361 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 DMTF1Q9Y222 760 aa5.73□□□□□ -1.49
CSDE1-210ENST00000525878 GPR32O75388 356 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 NOMO3P69849 1222 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 SLFN5Q08AF3 891 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 FAPQ12884 760 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 GEN1Q17RS7 908 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 NOMO2Q5JPE7 1267 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 ZGPATQ8N5A5 531 aaKnown RBP5.72□□□□□ -1.49
CSDE1-210ENST00000525878 OR2I1PQ8NGU4 316 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 PNKPQ96T60 521 aa5.72□□□□□ -1.49
CSDE1-210ENST00000525878 ARPP21Q9UBL0 812 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-210ENST00000525878 MTO1Q9Y2Z2 717 aaKnown RBP5.72□□□□□ -1.49
CSDE1-210ENST00000525878 CGB1A6NKQ9 187 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 EYA4O95677 639 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 ALAS1P13196 640 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 SLC5A3P53794 718 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 STAT4Q14765 748 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 NPM2Q86SE8 214 aaKnown RBP5.71□□□□□ -1.5
CSDE1-210ENST00000525878 SH2D3CQ8N5H7 860 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 FITM2Q8N6M3 262 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 GSTO2Q9H4Y5 243 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 CCM2LQ9NUG4 571 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-210ENST00000525878 C14orf119Q9NWQ9 140 aa5.71□□□□□ -1.5
CSDE1-210ENST00000525878 FAM171A2A8MVW0 826 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 FOLR3P41439 243 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 PROK1P58294 105 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 TAF7LQ5H9L4 462 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 UROC1Q96N76 676 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 TIMP4Q99727 224 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 DNAJC28Q9NX36 388 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 PCDHGA2Q9Y5H1 932 aa5.7□□□□□ -1.5
CSDE1-210ENST00000525878 CDHR4A6H8M9 788 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 WIPF3A6NGB9 483 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 PROM1O43490 865 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 SRGNP10124 158 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 FCER1AP12319 257 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 SOX5P35711 763 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 VWA1Q6PCB0 445 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 NOP9Q86U38 636 aaKnown RBP5.69□□□□□ -1.5
CSDE1-210ENST00000525878 CCHCR1Q8TD31 782 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 KMT5AQ9NQR1 393 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 ZNF277Q9NRM2 450 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-210ENST00000525878 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 ENTPD2Q9Y5L3 495 aa5.69□□□□□ -1.5
CSDE1-210ENST00000525878 SETD1BQ9UPS6 1966 aaKnown RBP5.69□□□□□ -1.5
CSDE1-210ENST00000525878 A0A1W2PS29 197 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 TCRBV7S2A1N4TA0A589 114 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 DNAJC9-AS1A6NH13 148 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 PEX1O43933 1283 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 PRKD3O94806 890 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 WT1P19544 449 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-210ENST00000525878 DDCP20711 480 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 SLC6A4P31645 630 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 SF3B3Q15393 1217 aaKnown RBP5.68□□□□□ -1.5
CSDE1-210ENST00000525878 ZNF788Q6ZQV5 615 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 C1QL2Q7Z5L3 287 aa5.68□□□□□ -1.5
CSDE1-210ENST00000525878 AHCYL2Q96HN2 611 aaKnown RBP5.68□□□□□ -1.5
CSDE1-210ENST00000525878 HEPHQ9BQS7 1158 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms