RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 COL4A2P08572 1712 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 CXCL8P10145 99 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 TNFSF9P41273 254 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 NUBP1P53384 320 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 ROR1Q01973 937 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 SPAG1Q07617 926 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 ZBTB41Q5SVQ8 909 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 PDXDC1Q6P996 788 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 REEP2Q9BRK0 252 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 CDH7Q9ULB5 785 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 BACE2Q9Y5Z0 518 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 CACNA1IQ9P0X4 2223 aa12.92□□□□□ -0.34
CLNS1A-202ENST00000525064 TBC1D4O60343 1298 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 GFRA3O60609 400 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 TOM1L1O75674 476 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 PLCG1P19174 1290 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 ARPP19P56211 112 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 MCL1Q07820 350 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 STRN3Q13033 797 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 MCM6Q14566 821 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 KARSQ15046 597 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC8B1Q6J4K2 584 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 ASCL5Q7RTU5 278 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 GPBP1Q86WP2 473 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 CCDC105Q8IYK2 499 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 FGF13Q92913 245 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC38A7Q9NVC3 462 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 WNT16Q9UBV4 365 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
CLNS1A-202ENST00000525064 TRAPPC3O43617 180 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 FAM189A1O60320 539 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 XYLBO75191 536 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 SEC24AO95486 1093 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 POU2F2P09086 479 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 MCM4P33991 863 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 MCM2P49736 904 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 MRPL58Q14197 206 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 UVSSAQ2YD98 709 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 PABPC1LQ4VXU2 614 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 ZPBP2Q6X784 338 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 DTWD2Q8NBA8 298 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 FIZ1Q96SL8 496 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
CLNS1A-202ENST00000525064 TTC26A0AVF1 554 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 PROB1E7EW31 1015 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 K7ENM7 598 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 STK25O00506 426 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 PPEF2O14830 753 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 SYN3O14994 580 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 CLDN3O15551 220 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 LRRN2O75325 713 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 ABLIM3O94929 683 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 DCNP07585 359 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 RHOP08100 348 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 CEBPBP17676 345 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 NBL1P41271 181 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 SMTNP53814 917 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 GPC5P78333 572 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 CUL4AQ13619 759 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 RAD54LQ92698 747 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 DDX12PQ92771 950 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 BICD1Q96G01 975 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 SUSD3Q96L08 255 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 AK8Q96MA6 479 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 FOXQ1Q9C009 403 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 IRF2BPLQ9H1B7 796 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 SLC2A4RGQ9NR83 387 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 DAXXQ9UER7 740 aaPredicted RBP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 ODF2LQ9ULJ1 636 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms