RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 PADI6Q6TGC4 694 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 ANKMY2Q8IV38 441 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 UCMAQ8WVF2 138 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 MAGEB18Q96M61 343 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 NPHS2Q9NP85 383 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 HSPA6P17066 643 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 INHBEP58166 350 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 TAF1BQ53T94 588 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-202ENST00000524773 DTX3LQ8TDB6 740 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 MKL1Q969V6 931 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 LRRC37BQ96QE4 947 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 RBM15Q96T37 977 aaKnown RBP eCLIP14.01□□□□□ -0.17
CAPN1-202ENST00000524773 DCLK3Q9C098 648 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 EXOC1LA0A1B0GW35 172 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 G3V3G9 751 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 TBX3O15119 743 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 APBA3O96018 575 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 PEX3P56589 373 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 TAS2R40P59535 323 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 BLMHQ13867 455 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 FBF1Q8TES7 1133 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 TBC1D22AQ8WUA7 517 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 CNKSR1Q969H4 720 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 SYT15Q9BQS2 421 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 MKNK1Q9BUB5 465 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 DENND2DQ9H6A0 471 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-202ENST00000524773 UBN1Q9NPG3 1134 aa14.01□□□□□ -0.17
CAPN1-202ENST00000524773 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 SORBS3O60504 671 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 GCAP28676 217 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 PRELPP51888 382 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ARHGEF18Q6ZSZ5 1173 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 APBB1IPQ7Z5R6 666 aaPredicted RBP14□□□□□ -0.17
CAPN1-202ENST00000524773 FAM71AQ8IYT1 594 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ACER1Q8TDN7 264 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 WHRNQ9P202 907 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 CCNB1P14635 433 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ITIH2P19823 946 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ATP4AP20648 1035 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 PLEKHG4Q58EX7 1191 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 PLA2G4FQ68DD2 849 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ZNF365Q70YC5 407 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 MTDHQ86UE4 582 aaKnown RBP14□□□□□ -0.17
CAPN1-202ENST00000524773 SLC7A6OSQ96CW6 309 aaPredicted RBP14□□□□□ -0.17
CAPN1-202ENST00000524773 VPS37BQ9H9H4 285 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 ZFATQ9P243 1243 aa14□□□□□ -0.17
CAPN1-202ENST00000524773 FAM47DPA6NHR8 397 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 FSCN2O14926 492 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 TPBGLP0DKB5 382 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 GNAZP19086 355 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 CA4P22748 312 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 MAGEA4P43358 317 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 PTDSS1P48651 473 aaKnown RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 POLGP54098 1239 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 STRN3Q13033 797 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 EAPPQ56P03 285 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 PCNX4Q63HM2 1172 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 SCARA3Q6AZY7 606 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 SPOPLQ6IQ16 392 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 SCAF8Q9UPN6 1271 aaKnown RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 MROH7Q68CQ1 1323 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 CYP1A2P05177 515 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 IL9RQ01113 521 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 CETN1Q12798 172 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 SETDB1Q15047 1291 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 KHDC1Q4VXA5 237 aaKnown RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 RNF220Q5VTB9 566 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 PHC3Q8NDX5 983 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 C7orf43Q8WVR3 580 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 ZC3H12CQ9C0D7 883 aaKnown RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 TRABDQ9H4I3 376 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 RNPEPL1Q9HAU8 725 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 SAE1Q9UBE0 346 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-202ENST00000524773 FAM198AQ9UFP1 575 aa13.99□□□□□ -0.17
CAPN1-202ENST00000524773 PLSCR1O15162 318 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CDH16O75309 829 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CRKP46108 304 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 MOXD1Q6UVY6 613 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 NACC1Q96RE7 527 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 C11orf70Q9BRQ4 267 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 BATF3Q9NR55 127 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 GRIN3BO60391 1043 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 ASMTLO95671 621 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 GGPS1O95749 300 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 IFNB1P01574 187 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 PLS3P13797 630 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 ATF7P17544 494 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CALB2P22676 271 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 RXRBP28702 533 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 ADSSP30520 456 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CIITAP33076 1130 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 RFC5P40937 340 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 HADHBP55084 474 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms