RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 G2E3Q7L622 706 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 RBM23Q86U06 439 aaKnown RBP5.95□□□□□ -1.46
PABPC1-223ENST00000523636 TLK2Q86UE8 772 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 C1orf210Q8IVY1 113 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 MSL3Q8N5Y2 521 aaKnown RBP5.95□□□□□ -1.46
PABPC1-223ENST00000523636 TOP6BLQ8N6T0 577 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 ZBTB44Q8NCP5 570 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 SPATA18Q8TC71 538 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 NELL1Q92832 810 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 TBC1D32Q96NH3 1257 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 MIPEPQ99797 713 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 SEZ6LQ9BYH1 1024 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 POMKQ9H5K3 350 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 SNTG2Q9NY99 539 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 SIRPGQ9P1W8 387 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CELSR1Q9NYQ6 3014 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 CENPEQ02224 2701 aa5.95□□□□□ -1.46
PABPC1-223ENST00000523636 DYTNA2CJ06 578 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 HIP1RO75146 1068 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 LRRN2O75325 713 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 EOMESO95936 686 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 SUPT20HL2P0C7V6 817 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 CYP7A1P22680 504 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 POLR2BP30876 1174 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 CTNNB1P35222 781 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 BMPR1AP36894 532 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 PURAQ00577 322 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 PLS1Q14651 629 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 PPP2R5EQ16537 467 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 C22orf34Q6ZV56 151 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 KIAA0907Q7Z7F0 614 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 MYOCDQ8IZQ8 938 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 REPS2Q8NFH8 660 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 BAHD1Q8TBE0 780 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 HNRNPLLQ8WVV9 542 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 KAZALD1Q96I82 304 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 APOL5Q9BWW9 433 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 ASPNQ9BXN1 380 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 TRIM55Q9BYV6 548 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 ZNF700Q9H0M5 742 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 TNKS2Q9H2K2 1166 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 PPCSQ9HAB8 311 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 RC3H2Q9HBD1 1191 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 SUCOQ9UBS9 1254 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 FEZ2Q9UHY8 353 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 ZNF214Q9UL59 606 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 NOL7Q9UMY1 257 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 SRPK3Q9UPE1 567 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 MAPK8IP1Q9UQF2 711 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 MRPS23Q9Y3D9 190 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 ZBED9Q6R2W3 1325 aa5.94□□□□□ -1.46
PABPC1-223ENST00000523636 USP9YO00507 2555 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 URB1O60287 2271 aaKnown RBP5.94□□□□□ -1.46
PABPC1-223ENST00000523636 MYH1P12882 1939 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PER2O15055 1255 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 CBFA2T2O43439 604 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 NARSO43776 548 aaKnown RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 CLEC3AO75596 197 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 RNASEH2AO75792 299 aaKnown RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PDE8BO95263 885 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 KCNK5O95279 499 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 IGLV1-40P01703 118 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 FAM87AP0C7U9 286 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 FAM200BP0CF97 657 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 FSTP19883 344 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ADMP35318 185 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 RIPK4P57078 832 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 CHMP4BP1P59074 171 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 RNF4P78317 190 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 TNFAIP2Q03169 654 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 NCAPHQ15003 741 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 LONRF1Q17RB8 773 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 CCDC57Q2TAC2 916 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 GRAMD1BQ3KR37 738 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 SPECC1Q5M775 1068 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ACBD5Q5T8D3 534 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ARMCX2Q7L311 632 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 FAM214BQ7L5A3 538 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 JAMLQ86YT9 394 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 MAGEB6Q8N7X4 407 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ZNF513Q8N8E2 541 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 FAM133AQ8N9E0 248 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 TEX19Q8NA77 164 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 MYRIPQ8NFW9 859 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 RNF141Q8WVD5 230 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 SNRNP27Q8WVK2 155 aaKnown RBP5.93□□□□□ -1.46
PABPC1-223ENST00000523636 TOP1MTQ969P6 601 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ABHD16BQ9H3Z7 469 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PTPRHQ9HD43 1115 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PI4KBQ9UBF8 816 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 GTF2IRD1Q9UHL9 959 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 ADAMTS5Q9UNA0 930 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PLAGL2Q9UPG8 496 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
PABPC1-223ENST00000523636 PCNX2A6NKB5 2137 aa5.92□□□□□ -1.46
PABPC1-223ENST00000523636 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
PABPC1-223ENST00000523636 ESYT3A0FGR9 886 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms