RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	KCNH6	Q9H252	994 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	KCNK12	Q9HB15	430 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	TUBGCP4	Q9UGJ1	667 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	BACE2	Q9Y5Z0	518 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	CDY1	Q9Y6F8	540 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	TCHH	Q07283	1943 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125		A0A087X0B3	334 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125		A0A0B4J269	797 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125		K7ENM7	598 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	HNRNPDL	O14979	420 aa	Known RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	KRT18	P05783	430 aa	Known RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ADRB2	P07550	413 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	LIG4	P49917	911 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	VCP	P55072	806 aa	Known RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	SPAG1	Q07617	926 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	MRPL58	Q14197	206 aa	Known RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ENOX2	Q16206	610 aa	Known RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ANKS3	Q6ZW76	656 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	BICD1	Q96G01	975 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ST6GALNAC4	Q9H4F1	302 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZHX3	Q9H4I2	956 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	PLEKHA5	Q9HAU0	1116 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	PIDD1	Q9HB75	910 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	EPS15L1	Q9UBC2	864 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	STK17A	Q9UEE5	414 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	TSC2	P49815	1807 aa		13.5	□□□□□ -0.25
VEGFA-223	ENST00000523125	MYMK	A6NI61	221 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	LACTBL1	A8MY62	500 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	ANKRD63	C9JTQ0	380 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	OGT	O15294	1046 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	TBCA	O75347	108 aa	Known RBP	13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	C8A	P07357	584 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	HOXA9	P31269	272 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	GBP2	P32456	591 aa	Predicted RBP	13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	MATR3	P43243	847 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	NASP	P49321	788 aa	Predicted RBP	13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	TDG	Q13569	410 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	PPM1L	Q5SGD2	360 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	VARS2	Q5ST30	1063 aa	Known RBP	13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	LIN9	Q5TKA1	542 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	SLC8B1	Q6J4K2	584 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	DYM	Q7RTS9	669 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	MAP4K3	Q8IVH8	894 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	RSAD2	Q8WXG1	361 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	STAM	Q92783	540 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	DNAJC19	Q96DA6	116 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	SUSD3	Q96L08	255 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	STRA6	Q9BX79	667 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	IKZF4	Q9H2S9	585 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	4e-7	■■■■■ 28.5
VEGFA-223	ENST00000523125	CCDC39	Q9UFE4	941 aa		13.49	□□□□□ -0.25
VEGFA-223	ENST00000523125	VPS13A	Q96RL7	3174 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	TISP43	B9A030	160 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	SYN3	O14994	580 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	CCL16	O15467	120 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	PPP1R37	O75864	691 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	ABLIM3	O94929	683 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	LAMP2	P13473	410 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	AVPR2	P30518	371 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	LRPAP1	P30533	357 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	NTHL1	P78549	312 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	UVSSA	Q2YD98	709 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	RRAGB	Q5VZM2	374 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZNF720	Q7Z2F6	126 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	SFR1	Q86XK3	245 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	SUGP1	Q8IWZ8	645 aa	Known RBP	13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	KRI1	Q8N9T8	703 aa	Known RBP	13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	PRSS33	Q8NF86	280 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZNF461	Q8TAF7	563 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	SLC7A14	Q8TBB6	771 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	DDX12P	Q92771	950 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	PANK2	Q9BZ23	570 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	IGSF9	Q9P2J2	1179 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	CPSF3	Q9UKF6	684 aa	Known RBP	13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	DUSP12	Q9UNI6	340 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	NUB1	Q9Y5A7	615 aa		13.48	□□□□□ -0.25
VEGFA-223	ENST00000523125	WDR27	A2RRH5	827 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	ANHX	E9PGG2	379 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	NARS	O43776	548 aa	Known RBP	13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	POU2F2	P09086	479 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	CYP3A5	P20815	502 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	HOXD11	P31277	338 aa	Predicted RBP	13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	ABCD1	P33897	745 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	GUCY2F	P51841	1108 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	ROR1	Q01973	937 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	NHLH1	Q02575	133 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	PPP2R3A	Q06190	1150 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	KYAT1	Q16773	422 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	SV2B	Q7L1I2	683 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	RTL10	Q7L3V2	364 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	GET4	Q7L5D6	327 aa	Predicted RBP	13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	SLC44A3	Q8N4M1	653 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	LINC00301	Q8NCQ3	95 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	KIF12	Q96FN5	646 aa		13.47	□□□□□ -0.25
VEGFA-223	ENST00000523125	MSTO1	Q9BUK6	570 aa		13.47	□□□□□ -0.25

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