RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 EP300Q09472 2414 aaPredicted RBP16.9■□□□□ 0.3
MRPS28-209ENST00000522987 WDR87Q6ZQQ6 2873 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 DMDP11532 3685 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 GVINP1Q7Z2Y8 2422 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 WDR27A2RRH5 827 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
MRPS28-209ENST00000522987 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 SEC24AO95486 1093 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 LRG1P02750 347 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 SP9P0CG40 484 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
MRPS28-209ENST00000522987 ELF1P32519 619 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.296e-6■■■■□ 21.9
MRPS28-209ENST00000522987 PDIA5Q14554 519 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 MLF2Q15773 248 aaPredicted RBP16.89■□□□□ 0.29
MRPS28-209ENST00000522987 SLC44A4Q53GD3 710 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 DTHD1Q6ZMT9 781 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 HINFPQ9BQA5 517 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 RAB34Q9BZG1 259 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 PTPRHQ9HD43 1115 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 ARHGAP28Q9P2N2 729 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 TUBGCP4Q9UGJ1 667 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
MRPS28-209ENST00000522987 KIF26AQ9ULI4 1882 aaPredicted RBP16.88■□□□□ 0.29
MRPS28-209ENST00000522987 ABLIM1O14639 778 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 MCM4P33991 863 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 GRM2Q14416 872 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 MPZL3Q6UWV2 235 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 C1orf210Q8IVY1 113 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 PNMA5Q96PV4 448 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 TMEM134Q9H6X4 195 aa16.88■□□□□ 0.29
MRPS28-209ENST00000522987 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
MRPS28-209ENST00000522987 SPATA6Q9NWH7 488 aaPredicted RBP16.88■□□□□ 0.29
MRPS28-209ENST00000522987 KANSL1LA0AUZ9 987 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 VWA3AA6NCI4 1184 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
MRPS28-209ENST00000522987 LMNAP02545 664 aaKnown RBP16.87■□□□□ 0.29
MRPS28-209ENST00000522987 MCF2P10911 925 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 GJA1P17302 382 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 CDR1P51861 262 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 STARD6P59095 220 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
MRPS28-209ENST00000522987 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 XKR4Q5GH76 650 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 TANGO2Q6ICL3 276 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 TPRG1Q6ZUI0 275 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 KIAA2013Q8IYS2 634 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 DCLK2Q8N568 766 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 SHDQ96IW2 340 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 SLC38A7Q9NVC3 462 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 FBXL5Q9UKA1 691 aa16.87■□□□□ 0.29
MRPS28-209ENST00000522987 TIMM13Q9Y5L4 95 aaPredicted RBP16.87■□□□□ 0.29
MRPS28-209ENST00000522987 FAM170BA6NMN3 283 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 CXCL8P10145 99 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 PTPN2P17706 415 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 PROZP22891 400 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 ID4P47928 161 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 GUCY2FP51841 1108 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 STRN3Q13033 797 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 NOLC1Q14978 699 aaKnown RBP eCLIP16.86■□□□□ 0.29
MRPS28-209ENST00000522987 SLC10A6Q3KNW5 377 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 MAML2Q8IZL2 1156 aaPredicted RBP16.86■□□□□ 0.29
MRPS28-209ENST00000522987 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 HAPLN2Q9GZV7 340 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 HEBP1Q9NRV9 189 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 INSL5Q9Y5Q6 135 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 SCN1AP35498 2009 aa16.86■□□□□ 0.29
MRPS28-209ENST00000522987 COL4A2P08572 1712 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 TSC2P49815 1807 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 OR4Q2P0C623 313 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 MYL4P12829 197 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 CPB1P15086 417 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 KCNE1P15382 129 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 TNFSF9P41273 254 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 CCR2P41597 374 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 ADCY1Q08828 1119 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 SLC8B1Q6J4K2 584 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 GPIHBP1Q8IV16 184 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 BICD1Q96G01 975 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 BCO2Q9BYV7 579 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 KCNH3Q9ULD8 1083 aa16.85■□□□□ 0.29
MRPS28-209ENST00000522987 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
MRPS28-209ENST00000522987 ZNF638Q14966 1978 aaKnown RBP16.85■□□□□ 0.29
MRPS28-209ENST00000522987 ARHGEF37A1IGU5 675 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 H7C4K7 107 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 ABLIM3O94929 683 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms