RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SLC39A2Q9NP94 309 aa19.44■□□□□ 0.7
CLK4-211ENST00000522556 USP15Q9Y4E8 981 aaPredicted RBP19.44■□□□□ 0.7
CLK4-211ENST00000522556 TTC28Q96AY4 2481 aa19.44■□□□□ 0.7
CLK4-211ENST00000522556 ADRB2P07550 413 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 CLCN4P51793 760 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 USP41Q3LFD5 358 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 SCARA3Q6AZY7 606 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 KIAA1841Q6NSI8 718 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 DCLRE1AQ6PJP8 1040 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 NELFCDQ8IXH7 590 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 EFCAB13Q8IY85 973 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 SYCP3Q8IZU3 236 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 SCFD1Q8WVM8 642 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 RXFP1Q9HBX9 757 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 SLC38A7Q9NVC3 462 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 PCDHB13Q9Y5F0 798 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 TSC2P49815 1807 aa19.43■□□□□ 0.7
CLK4-211ENST00000522556 SPATA31D3P0C874 917 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 KLRC2P26717 231 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 ABCD1P33897 745 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 ALCAMQ13740 583 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 BMS1Q14692 1282 aaKnown RBP19.42■□□□□ 0.7
CLK4-211ENST00000522556 SMAD2Q15796 467 aaKnown RBP19.42■□□□□ 0.7
CLK4-211ENST00000522556 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 SLFN12LQ6IEE8 588 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
CLK4-211ENST00000522556 SPATA31D4Q6ZUB0 917 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 KIAA0895Q8NCT3 520 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 LNX1Q8TBB1 728 aaPredicted RBP19.42■□□□□ 0.7
CLK4-211ENST00000522556 CASP10Q92851 521 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 KHSRPQ92945 711 aaKnown RBP eCLIP19.42■□□□□ 0.75e-6■■■□□ 19.1
CLK4-211ENST00000522556 DDX27Q96GQ7 796 aaKnown RBP19.42■□□□□ 0.7
CLK4-211ENST00000522556 UROC1Q96N76 676 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 TTPALQ9BTX7 342 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 PLEKHA5Q9HAU0 1116 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 EXOC7Q9UPT5 735 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 SCN1AP35498 2009 aa19.42■□□□□ 0.7
CLK4-211ENST00000522556 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 TGFB1I1O43294 461 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 FGFR3P22607 806 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 PSMD5Q16401 504 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 RARS2Q5T160 578 aaKnown RBP19.41■□□□□ 0.7
CLK4-211ENST00000522556 KRBA2Q6ZNG9 492 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 PALB2Q86YC2 1186 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 TMEM87AQ8NBN3 555 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 NOC3LQ8WTT2 800 aaKnown RBP19.41■□□□□ 0.7
CLK4-211ENST00000522556 PIK3R5Q8WYR1 880 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 PYM1Q9BRP8 204 aaKnown RBP19.41■□□□□ 0.7
CLK4-211ENST00000522556 EMILIN2Q9BXX0 1053 aa19.41■□□□□ 0.7
CLK4-211ENST00000522556 MTCL1Q9Y4B5 1905 aaKnown RBP19.41■□□□□ 0.7
CLK4-211ENST00000522556 PVALEFA0A1B0GWK0 134 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 EIF3DO15371 548 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLK4-211ENST00000522556 ZNF202O95125 648 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 ZP2Q05996 745 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 STK4Q13043 487 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 ARMCX5Q6P1M9 558 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.4■□□□□ 0.7
CLK4-211ENST00000522556 ZNF507Q8TCN5 953 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 SUSD6Q92537 303 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 FBXL18Q96ME1 805 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 CLSTN3Q9BQT9 956 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 MAN1C1Q9NR34 630 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 STK39Q9UEW8 545 aa19.4■□□□□ 0.7
CLK4-211ENST00000522556 UBQLN1Q9UMX0 589 aaKnown RBP19.4■□□□□ 0.7
CLK4-211ENST00000522556 TULP1O00294 542 aaPredicted RBP19.39■□□□□ 0.69
CLK4-211ENST00000522556 ADH1AP07327 375 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 GARTP22102 1010 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 LRPAP1P30533 357 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 DPYDQ12882 1025 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 TMEM132DQ14C87 1099 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 KYAT1Q16773 422 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 PUS10Q3MIT2 529 aaKnown RBP19.39■□□□□ 0.69
CLK4-211ENST00000522556 SPATA1Q5VX52 437 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 TMC5Q6UXY8 1006 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 CBWD2Q8IUF1 395 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 BRSK2Q8IWQ3 736 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 TMEM206Q9H813 350 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 USP25Q9UHP3 1055 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 MUC3AQ02505 3323 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 CUL9Q8IWT3 2517 aa19.39■□□□□ 0.69
CLK4-211ENST00000522556 FSD2A1L4K1 749 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 CLIC2O15247 247 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 SPTLC1O15269 473 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 TGM5O43548 720 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 RFPL2O75678 378 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 SP100P23497 879 aaPredicted RBP19.38■□□□□ 0.69
CLK4-211ENST00000522556 RPL9P32969 192 aaKnown RBP19.38■□□□□ 0.69
CLK4-211ENST00000522556 MCM4P33991 863 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 PTPRJQ12913 1337 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 POSTNQ15063 836 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 FMR1NBQ8N0W7 255 aaPredicted RBP19.38■□□□□ 0.69
CLK4-211ENST00000522556 AGPAT3Q9NRZ7 376 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 EXOC1Q9NV70 894 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 FNIP2Q9P278 1114 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 NUB1Q9Y5A7 615 aa19.38■□□□□ 0.69
CLK4-211ENST00000522556 DOCK6Q96HP0 2047 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 EXTL3O43909 919 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 GADD45BO75293 160 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 GLUD1P00367 558 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms