RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 IFT74Q96LB3 600 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 UROC1Q96N76 676 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 ACO2Q99798 780 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 CORO1BQ9BR76 489 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 PCDHGA2Q9Y5H1 932 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 PATJQ8NI35 1801 aa16.77■□□□□ 0.27
TRAPPC9-213ENST00000522504 F5P12259 2224 aa16.77■□□□□ 0.27
TRAPPC9-213ENST00000522504 K7ERI5 159 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 PODXLO00592 558 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 ABLIM1O14639 778 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 SPTLC1O15269 473 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 LILRB5O75023 590 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 PTPN2P17706 415 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 NPTX2P47972 431 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 ARPP19P56211 112 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 MTAPQ13126 283 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 MRPL58Q14197 206 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 KIFAP3Q92845 792 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 ELSPBP1Q96BH3 223 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZSWIM3Q96MP5 696 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 TARS2Q9BW92 718 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 PRMT8Q9NR22 394 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZSCAN32Q9NX65 697 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
TRAPPC9-213ENST00000522504 TPRP12270 2363 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 PRRG1O14668 218 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 MOSPD3O75425 235 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 ATF2P15336 505 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 RPS9P46781 194 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 PEX3P56589 373 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 TTC38Q5R3I4 469 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZNF852Q6ZMS4 543 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 TCEAL8Q8IYN2 117 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 ATRIPQ8WXE1 791 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 DDX19AQ9NUU7 478 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 FBXL5Q9UKA1 691 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 SMG5Q9UPR3 1016 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 INSL5Q9Y5Q6 135 aa16.75■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZFHX4Q86UP3 3567 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 NCANO14594 1321 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 LRG1P02750 347 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 TDGF1P13385 188 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 KCNE1P15382 129 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 MUTP22033 750 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 TGM1P22735 817 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 PROZP22891 400 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 MAGEA9P43362 315 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 ADCY1Q08828 1119 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 MAPK7Q13164 816 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZNF568Q3ZCX4 644 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 C8orf76Q96K31 380 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZBTB45Q96K62 511 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 ASB16Q96NS5 453 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 NELL2Q99435 816 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 FOXP1Q9H334 677 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 CYP4F11Q9HBI6 524 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 ARHGAP28Q9P2N2 729 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 NDRG2Q9UN36 371 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-213ENST00000522504 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 E9PMD0 336 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 SYN3O14994 580 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 HIP1RO75146 1068 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 GJA1P17302 382 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 ELF1P32519 619 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 VIPR2P41587 438 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 ORC2Q13416 577 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 IL17AQ16552 155 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 HAUS3Q68CZ6 603 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 CCDC83Q8IWF9 413 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 MRPL4Q9BYD3 311 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 CEP72Q9P209 647 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 CNTN3Q9P232 1028 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 ACACBO00763 2458 aa16.73■□□□□ 0.27
TRAPPC9-213ENST00000522504 SFI1A8K8P3 1242 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 HARSP12081 509 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 CDC25AP30304 524 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 TOB1P50616 345 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 CTXN3Q4LDR2 81 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 VITQ6UXI7 678 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 KCNK18Q7Z418 384 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms