RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KCNE1P15382 129 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 MLH1P40692 756 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 GUCY2FP51841 1108 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 XKR4Q5GH76 650 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 SCARA3Q6AZY7 606 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 IQCEQ6IPM2 695 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 PHLDB3Q6NSJ2 640 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 RRAGAQ7L523 313 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 LRRC8AQ8IWT6 810 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 C1orf127Q8N9H9 656 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 ZFP42Q96MM3 310 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 ZNF830Q96NB3 372 aaPredicted RBP23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 NT5C1BQ96P26 610 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 GAD1Q99259 594 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 UBE2TQ9NPD8 197 aaPredicted RBP23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 DPP3Q9NY33 737 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 DNAJC12Q9UKB3 198 aa23.04■■□□□ 1.28
R3HCC1-208ENST00000522012 ENPP3O14638 875 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ATF7P17544 494 aaPredicted RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 RFC2P35250 354 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 RAPGEF1Q13905 1077 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ZBTB6Q15916 424 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TCTN1Q2MV58 587 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 FAM43BQ6ZT52 329 aaPredicted RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ARHGEF19Q8IW93 802 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TMEM130Q8N3G9 435 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 BEST2Q8NFU1 509 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 C18orf25Q96B23 403 aaPredicted RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 RPS6KC1Q96S38 1066 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TSPAN18Q96SJ8 248 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 IMPG2Q9BZV3 1241 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 PCDH10Q9P2E7 1040 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 R3HCC1Q9Y3T6 440 aaKnown RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ZC3H11AO75152 810 aaKnown RBP eCLIP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ITGB3P05106 788 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ITGB8P26012 769 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 MYL6P60660 151 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 FAM189BP81408 668 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TSR1Q2NL82 804 aaKnown RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 OR8K1Q8NGG5 319 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 BAP1Q92560 729 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TATDN2Q93075 761 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 RSAD1Q9HA92 442 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 UBN1Q9NPG3 1134 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ABHD10Q9NUJ1 306 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 TUBGCP4Q9UGJ1 667 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 FBXL5Q9UKA1 691 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 AJAP1Q9UKB5 411 aaPredicted RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ITGA11Q9UKX5 1188 aa23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 UBQLN1Q9UMX0 589 aaKnown RBP23.03■■□□□ 1.28
R3HCC1-208ENST00000522012 ARL5CA6NH57 179 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 XPOTO43592 962 aaKnown RBP23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 EOMESO95936 686 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 SGSM1Q2NKQ1 1148 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 SPOPLQ6IQ16 392 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 ZNF598Q86UK7 904 aaKnown RBP23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 PPM1KQ8N3J5 372 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 SPAG5Q96R06 1193 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 PANX2Q96RD6 677 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 NAA15Q9BXJ9 866 aaKnown RBP23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 SIX4Q9UIU6 781 aa23.02■■□□□ 1.28
R3HCC1-208ENST00000522012 LRRC53A6NM62 1247 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 PTGESO14684 152 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 POLR2BP30876 1174 aaKnown RBP23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 RBP5P82980 135 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 ARHGAP44Q17R89 818 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 PDXDC1Q6P996 788 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 DNAJC7Q99615 494 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 PRKAG2Q9UGJ0 569 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 AGAP1Q9UPQ3 857 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 DAAM1Q9Y4D1 1078 aa23.01■■□□□ 1.27
R3HCC1-208ENST00000522012 RFX1P22670 979 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 AFF1P51825 1210 aaKnown RBP23■■□□□ 1.27
R3HCC1-208ENST00000522012 MFSD5Q6N075 450 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 CNKSR3Q6P9H4 555 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 TMEM199Q8N511 208 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 HELQQ8TDG4 1101 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 STK33Q9BYT3 514 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 APOBEC3GQ9HC16 384 aaKnown RBP23■■□□□ 1.27
R3HCC1-208ENST00000522012 MIOSQ9NXC5 875 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 INPP5FQ9Y2H2 1132 aa23■■□□□ 1.27
R3HCC1-208ENST00000522012 ASS1P00966 412 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 THP07101 528 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 CSF2RAP15509 400 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 SCNN1GP51170 649 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 MFAP3P55082 362 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 NOP14P78316 857 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 IKBKEQ14164 716 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 DRAP1Q14919 205 aaPredicted RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 ZNF699Q32M78 642 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 GPIHBP1Q8IV16 184 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 GSTCDQ8NEC7 633 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 CXorf38Q8TB03 319 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 KAT5Q92993 513 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 PPP1R10Q96QC0 940 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 NUCKS1Q9H1E3 243 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 KCNF1Q9H3M0 494 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 ZNHIT6Q9NWK9 470 aaKnown RBP22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 TMEM161AQ9NX61 479 aa22.99■■□□□ 1.27
R3HCC1-208ENST00000522012 PLAGL2Q9UPG8 496 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms