RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ELAC1Q9H777 363 aaKnown RBP9.14□□□□□ -0.95
VPS13B-210ENST00000521932 TMEM206Q9H813 350 aa9.14□□□□□ -0.95
VPS13B-210ENST00000521932 C1orf112Q9NSG2 853 aa9.14□□□□□ -0.95
VPS13B-210ENST00000521932 PIN4Q9Y237 131 aaKnown RBP9.14□□□□□ -0.95
VPS13B-210ENST00000521932 STYXL1Q9Y6J8 313 aa9.14□□□□□ -0.95
VPS13B-210ENST00000521932 TET1Q8NFU7 2136 aa9.14□□□□□ -0.95
VPS13B-210ENST00000521932 RANBP2P49792 3224 aaKnown RBP9.14□□□□□ -0.95
VPS13B-210ENST00000521932 MYH11P35749 1972 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 ABLIM1O14639 778 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 N4BP3O15049 544 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 BNIP3LO60238 219 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 TOM1L1O75674 476 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 EOMESO95936 686 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 BMP6P22004 513 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 HOXD13P35453 343 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 WDR5P61964 334 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 SNRPFP62306 86 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 FOXK2Q01167 660 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 MORC3Q14149 939 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 KNOP1Q1ED39 458 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 SKOR2Q2VWA4 1001 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 TMCO4Q5TGY1 634 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 MRPL10Q7Z7H8 261 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 GUF1Q8N442 669 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 TRIML1Q8N9V2 468 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 PHOSPHO2Q8TCD6 241 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 ZDHHC1Q8WTX9 485 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 TMEM174Q8WUU8 243 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 ABHD17AQ96GS6 310 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 CPB2Q96IY4 423 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 FAM105AQ9NUU6 356 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 MAN1B1Q9UKM7 699 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
VPS13B-210ENST00000521932 EXOC7Q9UPT5 735 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 USP20Q9Y2K6 914 aa9.13□□□□□ -0.95
VPS13B-210ENST00000521932 LAMA2P24043 3122 aaKnown RBP9.12□□□□□ -0.95
VPS13B-210ENST00000521932 UBE4BO95155 1302 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 A0A0B4J269 797 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 C2CD2LO14523 706 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 HNRNPDLO14979 420 aaKnown RBP9.12□□□□□ -0.95
VPS13B-210ENST00000521932 CLDN3O15551 220 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 TGFB1I1O43294 461 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 KIF20AO95235 890 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 ADSSP30520 456 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 RAB27AP51159 221 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 MCL1Q07820 350 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 NFKBIBQ15653 356 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 TWF2Q6IBS0 349 aaKnown RBP9.12□□□□□ -0.95
VPS13B-210ENST00000521932 SLFN12LQ6IEE8 588 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 SLC39A4Q6P5W5 647 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 TDHQ8IZJ6 230 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 PGBD3Q8N328 593 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 HAPLN2Q9GZV7 340 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
VPS13B-210ENST00000521932 TMEM161AQ9NX61 479 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 TMEM63CQ9P1W3 806 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
VPS13B-210ENST00000521932 GDAQ9Y2T3 454 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 PCDHB2Q9Y5E7 798 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 SLC4A7Q9Y6M7 1214 aa9.12□□□□□ -0.95
VPS13B-210ENST00000521932 LAMA3Q16787 3333 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 A0A1W2PPC1 479 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 PDXKO00764 312 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 FAM189A1O60320 539 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 DKK1O94907 266 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 AMHP03971 560 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 STAG3L1P0CL83 205 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 MCF2P10911 925 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 ATF7P17544 494 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 GARTP22102 1010 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 PPP1R2P41236 205 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 PRCPP42785 496 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 KCNJ6P48051 423 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 LIG4P49917 911 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 POU5F1Q01860 360 aaKnown RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 DCAF4L1Q3SXM0 396 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 CCDC183Q5T5S1 534 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 EEF1DP3Q658K8 133 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 ISM2Q6H9L7 571 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 APBB1IPQ7Z5R6 666 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 CDR2LQ86X02 465 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 NPAS4Q8IUM7 802 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 C12orf56Q8IXR9 622 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 MYOCDQ8IZQ8 938 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms