RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 DDX1Q92499 740 aaKnown RBP10.66□□□□□ -0.7
SPARC-202ENST00000520687 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
SPARC-202ENST00000520687 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 POP1Q99575 1024 aaKnown RBP10.66□□□□□ -0.7
SPARC-202ENST00000520687 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
SPARC-202ENST00000520687 FAM129AQ9BZQ8 928 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 CCDC113Q9H0I3 377 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 RAB17Q9H0T7 212 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 FAM114A2Q9NRY5 505 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 ERAP1Q9NZ08 941 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 NOC2LQ9Y3T9 749 aaKnown RBP10.66□□□□□ -0.7
SPARC-202ENST00000520687 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 ARID2Q68CP9 1835 aa10.66□□□□□ -0.7
SPARC-202ENST00000520687 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 HSF2BPO75031 334 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 PHACTR2O75167 634 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 IL18RAPO95256 599 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 TXNP10599 105 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 KRT5P13647 590 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 GTF2A2P52657 109 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 DRG2P55039 364 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 NLRP11P59045 1033 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 GUCY2DQ02846 1103 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 LAMTOR4Q0VGL1 99 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 BIRC3Q13489 604 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 IRF5Q13568 498 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 CUL2Q13617 745 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 DHX34Q14147 1143 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 LY6KQ17RY6 165 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 SPDYCQ5MJ68 293 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 LIN9Q5TKA1 542 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 MOB2Q70IA6 237 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.79e-8■■■■■ 58.5
SPARC-202ENST00000520687 SLC47A2Q86VL8 602 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 HDAC7Q8WUI4 952 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 SEC14L1Q92503 715 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 ZNF516Q92618 1163 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 LRRC45Q96CN5 670 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 FGD4Q96M96 766 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 PCDHB18PQ96TA0 734 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 ACO2Q99798 780 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 ZSWIM1Q9BR11 485 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 FAM124BQ9H5Z6 455 aaPredicted RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 EPB41L5Q9HCM4 733 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 OSGEPQ9NPF4 335 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 TAS2R14Q9NYV8 317 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 MTUS1Q9ULD2 1270 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 PACSIN2Q9UNF0 486 aaPredicted RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 PTCH2Q9Y6C5 1203 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 SPTBN5Q9NRC6 3674 aaKnown RBP10.65□□□□□ -0.7
SPARC-202ENST00000520687 COL1A2P08123 1366 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 LAMA3Q16787 3333 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 CNTNAP2Q9UHC6 1331 aa10.65□□□□□ -0.7
SPARC-202ENST00000520687 ACKR2O00590 384 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 SART1O43290 800 aaKnown RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 MSCO60682 206 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 ERLIN2O94905 339 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 MYCP01106 439 aaPredicted RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 GH1P01241 217 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 PRKCBP05771 671 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 GLI1P08151 1106 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 PTENP60484 403 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 PPFIA1Q13136 1202 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 PLCB4Q15147 1175 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 FAM187BQ17R55 369 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 DUOXA2Q1HG44 320 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 SGSM1Q2NKQ1 1148 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 ANKRD23Q86SG2 305 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 CD302Q8IX05 232 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 KAT5Q92993 513 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 TATDN2Q93075 761 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 ZNF653Q96CK0 615 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 RUFY1Q96T51 708 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 FZD8Q9H461 694 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 MRPL47Q9HD33 250 aaKnown RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 TXNRD2Q9NNW7 524 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 PRMT7Q9NVM4 692 aaPredicted RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 MORF4L1Q9UBU8 362 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 RASAL2Q9UJF2 1139 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 UTP11Q9Y3A2 253 aaKnown RBP10.65□□□□□ -0.71
SPARC-202ENST00000520687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.65□□□□□ -0.71
SPARC-202ENST00000520687 TELO2Q9Y4R8 837 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.71
SPARC-202ENST00000520687 TMEM265A0A087WTH1 108 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 H3BQF6 201 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 TNFRSF10AO00220 468 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 PODXLO00592 558 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 RAD51CO43502 376 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 ZMYND10O75800 440 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 CYP1A1P04798 512 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms