RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RAP1GAPP47736 663 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 OR1G1P47890 313 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 NOVA1P51513 510 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 RELBQ01201 579 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 DSC1Q08554 894 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF252P-AS1Q0IIN9 211 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ELAVL2Q12926 359 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 INTS6LQ5JSJ4 861 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 DGKKQ5KSL6 1271 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 RNF43Q68DV7 783 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 FUT10Q6P4F1 479 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 CWC27Q6UX04 472 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SPATA31D4Q6ZUB0 917 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 CACNA2D4Q7Z3S7 1137 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 MRPL10Q7Z7H8 261 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 WDR5BQ86VZ2 330 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 EXOC8Q8IYI6 725 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 COLGALT2Q8IYK4 626 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SYNPOQ8N3V7 929 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 DEPDC1BQ8WUY9 529 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 FAM3CQ92520 227 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 INSM2Q96T92 566 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF577Q9BSK1 485 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 BRD9Q9H8M2 597 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 LMAN1LQ9HAT1 526 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 POLMQ9NP87 494 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 RIC8AQ9NPQ8 531 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 VPS45Q9NRW7 570 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 GABBR1Q9UBS5 961 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 ADAM28Q9UKQ2 775 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 NDRG2Q9UN36 371 aaKnown RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 WASF3Q9UPY6 502 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 PRG3Q9Y2Y8 225 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 NEUROG3Q9Y4Z2 214 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SAMM50Q9Y512 469 aa5.47□□□□□ -1.53
SDCBP-207ENST00000520168 KIF26AQ9ULI4 1882 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-207ENST00000520168 SF3B1O75533 1304 aaKnown RBP eCLIP5.47□□□□□ -1.531e-6■■■■■ 66.8
SDCBP-207ENST00000520168 KIAA1549LQ6ZVL6 1849 aa5.46□□□□□ -1.53
SDCBP-207ENST00000520168 A0A087WZ62 844 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 IGKV6-21A0A0C4DH24 114 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 EIF4E1BA6NMX2 242 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 MEIS3P2A8K0S8 358 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 CHURC1-FNTBB4DL54 471 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 B4GALT3O60512 393 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 POMCP01189 267 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 CYP3A4P08684 503 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PSMC3P17980 439 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 CSRP1P21291 193 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 AXLP30530 894 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 RDXP35241 583 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 FNTBP49356 437 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 ADCY7P51828 1080 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 JAK3P52333 1124 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 SATB1Q01826 763 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PRKCEQ02156 737 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PTK2Q05397 1052 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 SRSF11Q05519 484 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 SF3A2Q15428 464 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 LONRF3Q496Y0 759 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 ANKRD45Q5TZF3 282 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 CASC1Q6TDU7 716 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 HEATR3Q7Z4Q2 680 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 SRGAP1Q7Z6B7 1085 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PLA2G4DQ86XP0 818 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 RDM1Q8NG50 284 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 RNF217Q8TC41 542 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 GAB3Q8WWW8 586 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 E2F7Q96AV8 911 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 CCDC51Q96ER9 411 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 FDXACB1Q9BRP7 624 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 TRMT61BQ9BVS5 477 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 SCNM1Q9BWG6 230 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 APOL6Q9BWW8 343 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 NIFKQ9BYG3 293 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 ARRDC1-AS1Q9H2J1 176 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 ZFP14Q9HCL3 533 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 ZNF334Q9HCZ1 680 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 POLIQ9UNA4 740 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 MRPS23Q9Y3D9 190 aaKnown RBP5.46□□□□□ -1.54
SDCBP-207ENST00000520168 GPSM3Q9Y4H4 160 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PPME1Q9Y570 386 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 PIAS3Q9Y6X2 628 aa5.46□□□□□ -1.54
SDCBP-207ENST00000520168 IGLV3-22A0A075B6J6 115 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 ARL5CA6NH57 179 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 CCDC69A6NI79 296 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 SHISA7A6NL88 538 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 H0Y626 953 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 K7ESF4 209 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 ZNF197O14709 1029 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 CCL16O15467 120 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 MAFO75444 373 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-207ENST00000520168 CSDE1O75534 798 aaKnown RBP5.45□□□□□ -1.54
SDCBP-207ENST00000520168 RPP40O75818 363 aaKnown RBP5.45□□□□□ -1.54
SDCBP-207ENST00000520168 TRIM16O95361 564 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 FAM86B2P0C5J1 330 aa5.45□□□□□ -1.54
SDCBP-207ENST00000520168 CHRNB1P11230 501 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms