RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GAS2O43903 313 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 TBCAO75347 108 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 ATG7O95352 703 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 WNT11O96014 354 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
SDC2-204ENST00000519914 KRT18P05783 430 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 POLR2MP0CAP2 368 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 SLC9A1P19634 815 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 RXRBP28702 533 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 STAT1P42224 750 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 MAPK7Q13164 816 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PAK2Q13177 524 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
SDC2-204ENST00000519914 RAPGEF1Q13905 1077 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PPP2R5EQ16537 467 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 ZSCAN26Q16670 478 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 CEP55Q53EZ4 464 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 KIAA1755Q5JYT7 1200 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 SPDYCQ5MJ68 293 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PDE12Q6L8Q7 609 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 LRIG3Q6UXM1 1119 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 ZNF720Q7Z2F6 126 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 CCDC91Q7Z6B0 441 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 VPS36Q86VN1 386 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 IFT20Q8IY31 132 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 IQCKQ8N0W5 287 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 FBXL6Q8N531 539 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 FAM133AQ8N9E0 248 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 USP38Q8NB14 1042 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 TTC16Q8NEE8 873 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PRMT6Q96LA8 375 aaPredicted RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 CRACR2AQ9BSW2 395 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 STK33Q9BYT3 514 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 RNF208Q9H0X6 261 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 BHMT2Q9H2M3 363 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 VCPKMTQ9H867 229 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 PARVGQ9HBI0 331 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 RBM12Q9NTZ6 932 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 VPS18Q9P253 973 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 DBR1Q9UK59 544 aaKnown RBP5.48□□□□□ -1.53
SDC2-204ENST00000519914 PNMA2Q9UL42 364 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
SDC2-204ENST00000519914 RLFQ13129 1914 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 PFASO15067 1338 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ARID2Q68CP9 1835 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 BRCA1P38398 1863 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 RSPH10B2B2RC85 870 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 F8VZ95 297 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.531e-24■■■■□ 20.8
SDC2-204ENST00000519914 BUB1O43683 1085 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 OPA1O60313 960 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ZEB2O60315 1214 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 FAM13AO94988 1023 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 H2AFZP0C0S5 128 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TMEM253P0C7T8 217 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 RSPH10BP0C881 870 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 NEFHP12036 1026 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SPINK2P20155 84 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 LMNB1P20700 586 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SOX5P35711 763 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 HSPA9P38646 679 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 EPS15P42566 896 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 LMAN1P49257 510 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 FMO5P49326 533 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CASP4P49662 377 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ARL4DP49703 201 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CACNB3P54284 484 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TNNC1P63316 161 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 POU5F1Q01860 360 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 PPATQ06203 517 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TCP10Q12799 353 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 PPFIA1Q13136 1202 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CUL1Q13616 776 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 KIF22Q14807 665 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 RPS6KA1Q15418 735 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CLUL1Q15846 466 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 EZH2Q15910 746 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 AOC3Q16853 763 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 KIAA0753Q2KHM9 967 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 NBPF9Q3BBW0 867 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CCDC181Q5TID7 509 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ICE2Q659A1 982 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ANKRD34AQ69YU3 496 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 C8orf74Q6P047 294 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ALKBH5Q6P6C2 394 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 LEKR1Q6ZMV7 388 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 H2AFVQ71UI9 128 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 EFCAB13Q8IY85 973 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 FAM186BQ8IYM0 893 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SYCE1Q8N0S2 351 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 C12orf50Q8NA57 414 aaPredicted RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 SLC17A8Q8NDX2 589 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 AGBL3Q8NEM8 1001 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 LMO3Q8TAP4 145 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CYP2W1Q8TAV3 490 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 HDAC7Q8WUI4 952 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CLP1Q92989 425 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 HVCN1Q96D96 273 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms