RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 TUT1Q9H6E5 874 aaKnown RBP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 FBXO6Q9NRD1 293 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 DMTF1Q9Y222 760 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ALG6Q9Y672 507 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 CAMTA1Q9Y6Y1 1673 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 UBR1Q8IWV7 1749 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 C15orf38-AP3S2A0A0A6YYH1 394 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 LSM1O15116 133 aaKnown RBP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 RELAQ04206 551 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 RASGRF1Q13972 1273 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 STAT4Q14765 748 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 MYLK3Q32MK0 819 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 FBXL19Q6PCT2 694 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ARPINQ7Z6K5 226 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 GLYCTKQ8IVS8 523 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.36□□□□□ -0.11
PABPC1-208ENST00000519004 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 SNX27Q96L92 541 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ZSWIM1Q9BR11 485 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 OSBPL8Q9BZF1 889 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 HDAC9Q9UKV0 1011 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 ASAP1Q9ULH1 1129 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 PCDH11YQ9BZA8 1340 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 TMEM2Q9UHN6 1383 aa14.36□□□□□ -0.11
PABPC1-208ENST00000519004 FAM170AA1A519 330 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 NDC80O14777 642 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 GSTT2P0CG29 244 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 GSTT2BP0CG30 244 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 GCAP28676 217 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 PFKPQ01813 784 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 OVGP1Q12889 678 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 ANKRD20A4Q4UJ75 823 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 GJB7Q6PEY0 223 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 SLC2A7Q6PXP3 512 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 PIP4K2CQ8TBX8 421 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 RAD54LQ92698 747 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 STX8Q9UNK0 236 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 A0A0G2JND7 137 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 ITIH2P19823 946 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 IVDP26440 423 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 KRT17Q04695 432 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 PPIDQ08752 370 aaKnown RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 UBE4AQ14139 1066 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 RNF111Q6ZNA4 994 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 FAM186BQ8IYM0 893 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 FBXO27Q8NI29 283 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 CCDC110Q8TBZ0 833 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 CLPTM1LQ96KA5 538 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 TTC25Q96NG3 672 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 THAP2Q9H0W7 228 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 HESX1Q9UBX0 185 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 PLA2G4CQ9UP65 541 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 SMG5Q9UPR3 1016 aaKnown RBP14.35□□□□□ -0.11
PABPC1-208ENST00000519004 FRMPD4Q14CM0 1322 aa14.35□□□□□ -0.11
PABPC1-208ENST00000519004 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SH3PXD2BA1X283 911 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 ADCY3O60266 1144 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 NMT2O60551 498 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CCNT1O60563 726 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 TOM1O60784 492 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CLPTM1O96005 669 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CPA2P48052 419 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 ACADVLP49748 655 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 ITGA8P53708 1063 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CDK16Q00536 496 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 KIF22Q14807 665 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 LRRC36Q1X8D7 754 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SEL1L2Q5TEA6 688 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 LPCAT4Q643R3 524 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 THOC7Q6I9Y2 204 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 TTC7BQ86TV6 843 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 UBL4BQ8N7F7 174 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 UTP6Q9NYH9 597 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CROTQ9UKG9 612 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 TRMUO75648 421 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 CIB2O75838 187 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 STK10O94804 968 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 COG7P83436 770 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms