RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 COLEC11Q9BWP8 271 aa26.24■■□□□ 1.79
PCM1-209ENST00000518930 SPG21Q9NZD8 308 aa26.24■■□□□ 1.79
PCM1-209ENST00000518930 NT5C1B-RDH14C9J2C7 533 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 C5orf67F2Z3F1 127 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 PODXLO00592 558 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 GNA14O95837 355 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 DUOXA2Q1HG44 320 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 LMBRD2Q68DH5 695 aaPredicted RBP26.23■■□□□ 1.79
PCM1-209ENST00000518930 SLC39A11Q8N1S5 342 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 PARD3BQ8TEW8 1205 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 TMEM169Q96HH4 297 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 MTMR12Q9C0I1 747 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 METTL14Q9HCE5 456 aaKnown RBP26.23■■□□□ 1.79
PCM1-209ENST00000518930 INTS13Q9NVM9 706 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 CACNG4Q9UBN1 327 aa26.23■■□□□ 1.79
PCM1-209ENST00000518930 ARMCX3Q9UH62 379 aaPredicted RBP26.23■■□□□ 1.79
PCM1-209ENST00000518930 COL4A4P53420 1690 aaPredicted RBP26.22■■□□□ 1.79
PCM1-209ENST00000518930 LRRIQ3A6PVS8 624 aaPredicted RBP26.22■■□□□ 1.79
PCM1-209ENST00000518930 RPL9P32969 192 aaKnown RBP26.22■■□□□ 1.79
PCM1-209ENST00000518930 CLCNKBP51801 687 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 ENPEPQ07075 957 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 MED15Q96RN5 788 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 PAAF1Q9BRP4 392 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 FUCA2Q9BTY2 467 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 GZF1Q9H116 711 aaPredicted RBP26.22■■□□□ 1.79
PCM1-209ENST00000518930 DPP3Q9NY33 737 aa26.22■■□□□ 1.79
PCM1-209ENST00000518930 R3HCC1Q9Y3T6 440 aaKnown RBP26.22■■□□□ 1.79
PCM1-209ENST00000518930 PTPRJQ12913 1337 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 LRPAP1P30533 357 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 GUCY2FP51841 1108 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 AP3M2P53677 418 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 KRT17Q04695 432 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 UPP1Q16831 310 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 DCAF17Q5H9S7 520 aaPredicted RBP26.21■■□□□ 1.79
PCM1-209ENST00000518930 FRMD5Q7Z6J6 570 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 FAM114A1Q8IWE2 563 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 KLHL23Q8NBE8 558 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 ENOX1Q8TC92 643 aaKnown RBP26.21■■□□□ 1.79
PCM1-209ENST00000518930 PLEKHO2Q8TD55 490 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 RABGGTAQ92696 567 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 IGSF21Q96ID5 467 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 POP1Q99575 1024 aaKnown RBP26.21■■□□□ 1.79
PCM1-209ENST00000518930 ITGA11Q9UKX5 1188 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 CHD9Q3L8U1 2897 aa26.21■■□□□ 1.79
PCM1-209ENST00000518930 PLXNA4Q9HCM2 1894 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 STX10O60499 249 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 FGF18O76093 207 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 B3GAT3O94766 335 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 KIF4AO95239 1232 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 TRIM49P0CI25 452 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 TRIM49CP0CI26 452 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 MYL5Q02045 173 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 TCERG1LQ5VWI1 586 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 GPR153Q6NV75 609 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 DCLRE1AQ6PJP8 1040 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 OR5B17Q8NGF7 314 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 THAP9Q9H5L6 903 aa26.2■■□□□ 1.78
PCM1-209ENST00000518930 MAGEC2Q9UBF1 373 aaPredicted RBP26.2■■□□□ 1.78
PCM1-209ENST00000518930 TADA2AO75478 443 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 ITGB3P05106 788 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 DLG4P78352 724 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 CLDN10P78369 228 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 GPM6BQ13491 265 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 C9orf57Q5W0N0 161 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 HASPINQ8TF76 798 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 BORCS6Q96GS4 357 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 CNOT6LQ96LI5 555 aaKnown RBP26.19■■□□□ 1.78
PCM1-209ENST00000518930 BPIFA3Q9BQP9 254 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 TTYH1Q9H313 450 aaPredicted RBP26.19■■□□□ 1.78
PCM1-209ENST00000518930 MARCH5Q9NX47 278 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 ADAM28Q9UKQ2 775 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 NFE2L3Q9Y4A8 694 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 NUB1Q9Y5A7 615 aa26.19■■□□□ 1.78
PCM1-209ENST00000518930 H3BNC9 293 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 TMEM189-UBE2V1I3L0A0 370 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 IKBKBO14920 756 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 KRT19P08727 400 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 PLCB3Q01970 1234 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 BIRC3Q13489 604 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 TMEM173Q86WV6 379 aaPredicted RBP26.18■■□□□ 1.78
PCM1-209ENST00000518930 CREBRFQ8IUR6 639 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 C1orf127Q8N9H9 656 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 GDPD5Q8WTR4 605 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 FAM84AQ96KN4 292 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 ZNF560Q96MR9 790 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 STK39Q9UEW8 545 aa26.18■■□□□ 1.78
PCM1-209ENST00000518930 PUF60Q9UHX1 559 aaKnown RBP26.18■■□□□ 1.78
PCM1-209ENST00000518930 SF3B1O75533 1304 aaKnown RBP eCLIP26.17■■□□□ 1.781e-6■■■□□ 17.2
PCM1-209ENST00000518930 F8W810 466 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 PHACTR2O75167 634 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 ITGB1P05556 798 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 POLR2BP30876 1174 aaKnown RBP26.17■■□□□ 1.78
PCM1-209ENST00000518930 ZNF165P49910 485 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 MARSP56192 900 aaKnown RBP26.17■■□□□ 1.78
PCM1-209ENST00000518930 UBE3AQ05086 875 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 TRAPPC11Q7Z392 1133 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 AOPEPQ8N6M6 819 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 BCL7CQ8WUZ0 217 aaPredicted RBP26.17■■□□□ 1.78
PCM1-209ENST00000518930 MMRN2Q9H8L6 949 aa26.17■■□□□ 1.78
PCM1-209ENST00000518930 ANO9A1A5B4 782 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms