RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ARHGEF37A1IGU5 675 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 TMEM189-UBE2V1I3L0A0 370 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLN8-203ENST00000518780 PHACTR2O75167 634 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 POMCP01189 267 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 NFICP08651 508 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 FAM163BP0C2L3 166 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 LAG3P18627 525 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 FMO5P49326 533 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
CLN8-203ENST00000518780 MXI1P50539 228 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 DLG4P78352 724 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 MYO1EQ12965 1108 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 TRPC3Q13507 836 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 KRT31Q15323 416 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 RAB30Q15771 203 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 SGSM1Q2NKQ1 1148 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 C1orf220Q5T0J3 134 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 FKBP15Q5T1M5 1219 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 EFCAB13Q8IY85 973 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 COLGALT2Q8IYK4 626 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 CCDC150Q8NCX0 1101 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 PLEKHO2Q8TD55 490 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
CLN8-203ENST00000518780 FAM81BQ96LP2 452 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 SAMD11Q96NU1 681 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 COLEC11Q9BWP8 271 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 FAM124BQ9H5Z6 455 aaPredicted RBP10.23□□□□□ -0.77
CLN8-203ENST00000518780 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 MIOSQ9NXC5 875 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 DAAM1Q9Y4D1 1078 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 LTBP2Q14767 1821 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 TET1Q8NFU7 2136 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 CEP290O15078 2479 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 LGALS16A8MUM7 142 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 PIRO00625 290 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 CBFA2T2O43439 604 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 SERPINC1P01008 464 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 RB1P06400 928 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 TRIM49P0CI25 452 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 TRIM49CP0CI26 452 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 PPM1AP35813 382 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 GCLMP48507 274 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 AFF1P51825 1210 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 COPB1P53618 953 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 SMAD3P84022 425 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 PPP3CAQ08209 521 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 ELAVL2Q12926 359 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 BIRC3Q13489 604 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 UPP1Q16831 310 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 GLRA4Q5JXX5 417 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 SARM1Q6SZW1 724 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 GAS2L3Q86XJ1 694 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 FBXL13Q8NEE6 735 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 ZNF560Q96MR9 790 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
CLN8-203ENST00000518780 PLVAPQ9BX97 442 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 RBSNQ9H1K0 784 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 NRDE2Q9H7Z3 1164 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 RAB20Q9NX57 234 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 MSRAQ9UJ68 235 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 PLAGL2Q9UPG8 496 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 PCDHB12Q9Y5F1 795 aa10.22□□□□□ -0.77
CLN8-203ENST00000518780 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 DDHD2O94830 711 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 GALTP07902 379 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 ATP1A3P13637 1013 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 P4HA1P13674 534 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 WNT7BP56706 349 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 FANCCQ00597 558 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 MYL7Q01449 175 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 NCOA4Q13772 614 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 LRIT3Q3SXY7 679 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 SV2CQ496J9 727 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 WDR44Q5JSH3 913 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 MIIPQ5JXC2 388 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 TDRD10Q5VZ19 366 aaKnown RBP10.21□□□□□ -0.77
CLN8-203ENST00000518780 C9orf57Q5W0N0 161 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 FAM117BQ6P1L5 589 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 GBP6Q6ZN66 633 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 DPH6Q7L8W6 267 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 APTXQ7Z2E3 356 aaKnown RBP10.21□□□□□ -0.77
CLN8-203ENST00000518780 ZNF280BQ86YH2 543 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 CXorf38Q8TB03 319 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 SPATA18Q8TC71 538 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 C18orf25Q96B23 403 aaPredicted RBP10.21□□□□□ -0.77
CLN8-203ENST00000518780 IQCDQ96DY2 449 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 ZNF558Q96NG5 402 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 CWH43Q9H720 699 aa10.21□□□□□ -0.77
CLN8-203ENST00000518780 GDAP2Q9NXN4 497 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms