RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SCG2P13521 617 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SYN1P17600 705 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 FPR2P25090 351 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ABCD3P28288 659 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACSL1P33121 698 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 BMP8BP34820 402 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARL3P36405 182 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 MLH1P40692 756 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 HNF4AP41235 474 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 MSH2P43246 934 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCNC1P48547 511 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TPD52P55327 224 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBASH3AP57075 661 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SOX4Q06945 474 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPARAQ07869 468 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADCY2Q08462 1091 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADAM9Q13443 819 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAMLD1Q13495 774 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACVR2BQ13705 512 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLMAPQ14BN4 828 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TARBP2Q15633 366 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 DUOXA2Q1HG44 320 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 HABP4Q5JVS0 413 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TTC38Q5R3I4 469 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 BTBD8Q5XKL5 378 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 GALNT17Q6IS24 598 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 CNSTQ6PJW8 725 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 IL27RAQ6UWB1 636 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 UNC5DQ6UXZ4 953 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 RRAGAQ7L523 313 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NLRP14Q86W24 1093 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 RBM12BQ8IXT5 1001 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 RPAP2Q8IXW5 612 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 DZIP1LQ8IYY4 767 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NUP93Q8N1F7 819 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 OTUD6BQ8N6M0 293 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR1N1Q8NGS0 311 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SCAMP5Q8TAC9 235 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 STON2Q8WXE9 905 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 THAP4Q8WY91 577 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NMD3Q96D46 503 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF845Q96IR2 970 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 MRGPRX1Q96LB2 322 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZFP42Q96MM3 310 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PTCHD1Q96NR3 888 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TWNKQ96RR1 684 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP1R9BQ96SB3 815 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 DMRTA2Q96SC8 542 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMPRSS13Q9BYE2 586 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAGEB5Q9BZ81 275 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 EPS8L2Q9H6S3 715 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 GREM2Q9H772 168 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NECTIN3Q9NQS3 549 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 RIC8BQ9NVN3 520 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 RGL1Q9NZL6 768 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TBX20Q9UMR3 447 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 CDY2AQ9Y6F7 541 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZFP37Q9Y6Q3 630 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 FLT1P17948 1338 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SYNRGQ9UMZ2 1314 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 SHISA3A0PJX4 238 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM90A27PA6NNH2 459 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 H0Y626 953 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 GOLGA6L22H0YM25 854 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 KIAA0355O15063 1070 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC7A4O43246 635 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 DGKIO75912 1065 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 KRT38O76015 456 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 MLYCDO95822 493 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRKCBP05771 671 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 CSH1P0DML2 217 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 CSH2P0DML3 217 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 SDHAP31040 664 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 NNMTP40261 264 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 DPP6P42658 865 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 AP2B1P63010 937 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 DLG4P78352 724 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM29Q14134 588 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 COG2Q14746 738 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ODF2Q5BJF6 829 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 METTL24Q5JXM2 366 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 RTP2Q5QGT7 225 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAP3K21Q5TCX8 1036 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRAMEF9Q5VWM5 478 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 FYB2Q5VWT5 728 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATG16L1Q676U5 607 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 KIAA1841Q6NSI8 718 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TATDN1Q6P1N9 297 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 ALKBH5Q6P6C2 394 aaKnown RBP4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 FOXR1Q6PIV2 292 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 KLHL24Q6TFL4 600 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 BTNL9Q6UXG8 535 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 KIAA1211Q6ZU35 1233 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 BBS12Q6ZW61 710 aa4.37□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM46Q7Z4K8 759 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms